Rhododendron vialii: 131304691
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Entry
131304691 CDS
T09330
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00040
Pentose and glucuronate interconversions
rvl01100
Metabolic pathways
Module
rvl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131304691
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
131304691
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GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
131304691
NCBI-ProteinID:
XP_058188007
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Position
10a:3182150..3192281
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AA seq
491 aa
AA seq
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MSSVGLRDGDLQNWHFLRRQLVGIGAAASVPLIQFASFGFGESSSSQNGLCTAAAIALFV
SSDLVKTPPDFTSLEDEDETIAYAGHAPWRIEDEMKTRREAWNSDSGSLRRCSHGSSASH
ANQKESGMFEGITSLLDDSDSGSSGNTTTYNVLNFRATGDGSTDDTQIDGTLIAPSDPSE
WKCKDDKCSKWITFHNLNHLSISGSGTINGQGTQWWACKDCGTKPRGFTLSDSNNVYISD
LTFMDSPQKHIALERSTWVHATNLTITAPENSPNTDGIHVQQSRNVFIEQTLIGTGDDCI
SIGDGSAYLNISGITCGPGHGISVGSLGFNGANNTVEHVYVSDVVFRGTSNGARIKTWQG
GKGYATDITFQRITTFDSRYPIIIDQFYCEPNQTCLTQVSISLRSVFFDLDIPSSTSAVE
VSNVKYIDIHGTSSGETAVKFACSKTVPCTDISMNDIDLTSDGTSNTISSCQNVQGKQHD
VFPSVPCLTSN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgttgggcttcgagacggcgacttgcagaattggcatttcttgaggcggcaa
ttggttggtattggggccgctgcctctgtgcctctgattcagtttgccagttttggattt
ggggagtcgtcgagctcccaaaacggcctctgcaccgccgccgcaatcgcgttgttcgtc
tcaagtgacctcgtcaagacgccgcccgacttcacctccttagaagacgaagacgagacg
atcgcctatgccggccacgcgccttggcgaatagaagacgagatgaagacaagacgagag
gcttggaactcggattccggctccctccgccgctgctcacatggctcctccgcctcccat
gcaaatcaaaaggaatcaggcatgttcgaaggaataacttcattgctagacgattctgac
tctggttcctctggcaatactactacttataacgtgcttaatttccgggcaactggagat
ggatctacggatgatacccagatagatggaaccctaatcgcaccaagtgatccatcagaa
tggaaatgcaaggacgataagtgcagtaaatggatcacctttcacaacctcaatcacctt
tccatttcagggtctggtactatcaatggccagggaacacaatggtgggcttgcaaggac
tgtgggaccaaaccaaggggatttacgctatcagactccaacaatgtgtatatcagtgac
ctaactttcatggacagcccccaaaagcacattgccttggaaaggtcgacatgggtacat
gctactaatctgaccatcaccgcacctgagaacagccccaacaccgacgggattcatgtt
caacaatctcgaaacgtcttcatagaacaaactctcatcggcactggtgatgactgtatt
tccattggagatggttcggcatatctcaacatcagtgggatcacatgtggaccaggtcat
ggcataagtgtgggaagtctaggttttaatggggcaaacaacacagttgagcatgtctac
gtaagcgatgtggttttcagaggaacttcaaatggagcaagaataaagacatggcaggga
gggaaaggatacgcaacggacattacgttccaacggataactacttttgactcacgatac
cccatcatcatcgatcaattctattgtgagcccaatcaaacatgtctaactcaagtaagc
atttctctccgctccgtcttttttgatttggatattccgagttctacatcagcggtggaa
gttagtaacgtgaaatacattgacatacatggcacatcgagtggagagactgcagtaaaa
tttgcatgcagcaagacagttccgtgcacagacatatccatgaacgacatcgacctcacc
agtgatggtacaagcaatacaatatcgtcgtgtcaaaatgttcaaggcaagcagcatgat
gttttccccagcgtcccttgcttgacatcaaattaa
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