KEGG   Rhododendron vialii: 131304867
Entry
131304867         CDS       T09330                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
rvl  Rhododendron vialii
Pathway
rvl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    131304867
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rvl03400]
    131304867
DNA repair and recombination proteins [BR:rvl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     131304867
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 UBM
Other DBs
NCBI-GeneID: 131304867
NCBI-ProteinID: XP_058188295
LinkDB
Position
10a:2400128..2411460
AA seq 1525 aa
MGVHGLWDLVAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHVLGFFR
RICKLLFLRTKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLINHLKAMRLK
ELANDLEKQRQQNDAKGKKVVIDQVELTGSNAEGINTSPFSCNQEALDEMLAASLAAEDD
DSFTGNASTSGVDIPFEEEDEEEEEDEDEEMVLPAMNGKVDPAVLAALPPSMQLDLLVQM
RERLMAENRQKYQKVKKAPAKFSELQIQAYLKTVAFRREIDEVRKSASGKGVGGVQTSRI
ASEANREFLFSSSFTGDKQILTSVGGERHGEKQDQTPLQPPPSDPVESIASTKKSNAETG
AVTDDTVFDDDIETYVDERGHVRVSRVRAMGMRMTRDLQRNLDLMKEIEQDTMYTNVIMG
SESGFDKNAGGISRNLPDKIQLKKASYQSSDGSVHLDDRGDQSASKNLNSMEISFEDDGG
HEYVDDDLFTRLVAGDTVLNSKGSVLPSEKHSCDSDSDIDWEEGVVVEKGNSSLPDVGKE
TKLSLAEGRINDESDVEWEDGDSTLLNCASTSLAEPSNNASKGALEEDADFQEAIRRSLE
DIREQKSSDASCEDENLKEARRMAHEIKGIQENGKPVPNLPQENTLQVDKPSFEVVSGVA
RLEAEAGMDILSTDDSPVATSMVVDTDSIEGLLDKPFERYPKCHAELFRQDTIEGGNLLG
GIGDKKSVPPIGEQGFHLVVEEVKPNAGVQMSTSTTNFGVSSEISDMVSGETPPAIAADA
HVNVFEAAAHNLVVGTPQQGESSAKGLRINHDDVQKLPNKNIPDNSAEQKGDENFTLEDD
KIKPMEVTEASLEEERINLSRERIDLEDEQRRLERNAESVSSEMFTECQELLQMFGLPYI
IAPMEAEAQCAYMELSNLVDGVVTDDSDVFLFGAQNVYKNIFDDRKYVETYFVKDIEKEL
GLTREQLIRMALLLGSDYTEGVSGIGIVNAIEVMNAFPEEDGLTKFREWIESPDPTILGK
LGVQTGSSSRNRGSKVGEDTVSCSNSDMDGLSAPAQTVMQAMDDIQNTKQIFMDKHRNVS
KNWHIPSSFPNEAVISAYVSPQVDKSTEPFSWGKPDLFFLRKLCWEKFGWNTQKADELLL
PVLKEYNKHETQLRLEAFYTFNERFAKIRSKRINKAVKGITGKTSVEESRDDKSGKSVTG
TEDCITRDESNSTHKSAVKLSKKRKNKESEPSEARNIDPVMQTEGRKNTRQKLTARGRGR
GRGSERRQANGRGRRIKSSWLEDGENSSDSDCISENEKEKQDKKLGRPRELRKSTRTRNA
VKYTSDDDVEIDEPGKASHDEENCSDEEAVKEPFDDHHLVGDTAASTGEKNPHKEEHSSG
DYFEMGGGFCSIEEPELKTDEPSVGQNGDPSFEVESFQEYLNMGGGFCLDEDETKEDPHK
QASEPATELVSDDSDPHCSNIGEEANPKRRKADALYNEQNSDHLTPRASNNSSSPPESIG
QDDSGTPPMKSLSAMPYLRRKRRKS
NT seq 4578 nt   +upstreamnt  +downstreamnt
atgggggtccacggcctctgggacctcgtagcccccgtcggccgccgcgtctccgttgaa
accctcgccggaaaaaaactcgcaatcgatgcgagcatatggatggtccagttcatgaag
gcgatgcgagacgagaagggagagatggtgaggaacgcgcacgtgctagggttcttcagg
cggatatgcaagctgcttttcctccgcacgaaacccgtgttcgtcttcgacggcgccacg
ccggctctcaagcggcggaccgtgattgcgcgtcgtagacagcgggagaatgcgcagaca
aagatccggaagaccgccgagaaactcctgatcaatcacctcaaggcaatgaggttgaaa
gagctggccaatgatctcgagaaacagagacagcagaatgatgctaagggtaaaaaggtt
gtcatagatcaagtggaattgacaggaagtaatgcggagggaatcaatacctcgccattc
agttgcaaccaggaagcactagatgaaatgttggcagcatcccttgcggcggaggatgat
gatagttttactggcaatgcatcaacctctggtgtggatatcccatttgaagaagaggac
gaagaagaagaagaagacgaagacgaagagatggtacttccagcaatgaatggaaaagtt
gatcctgccgtgttagctgctttacctccatcaatgcaacttgatcttcttgttcagatg
agggagagattgatggcagaaaacagacaaaaatatcagaaggtcaaaaaggcccctgcg
aagttttcagaattacaaatacaggcctatctaaaaaccgttgctttccgccgggagata
gatgaagtgcgaaaatccgcttctgggaagggagtaggtggtgtccagacttcgcggata
gcctctgaagccaatagagaatttctattctcgtcgtctttcactggggataaacaaatt
ctcacgtctgttggcggagagagacatggtgagaagcaagatcagacaccattacaacct
cctccttcagaccctgtggaaagcattgcatctaccaagaagtccaacgctgaaactgga
gcagtcactgatgacactgtatttgatgatgatattgagacatatgtggatgagagagga
catgttcgagtcagtcgagtgagagctatgggaatgcgtatgactcgagatttacaaagg
aatttggatttaatgaaagagatcgagcaagacacaatgtacacaaatgtgattatgggg
agtgagtctggtttcgataaaaatgcaggcggcatctcaagaaatctacctgataaaatc
cagcttaaaaaagcttcatatcagagtagtgatggatcagttcacttagatgacagaggt
gatcaatctgcgtctaaaaatttgaactcgatggagatatcctttgaggatgacggtggt
cacgaatatgttgatgatgatctatttactcgtttagtggcaggagatacagtactgaat
tctaaaggtagtgttcttccttcagagaaacattcttgtgactcggattcagatattgat
tgggaagaaggggtggttgtagagaaaggtaatagttcacttcctgatgttggaaaggaa
accaagctctctcttgctgaaggtcgcattaatgatgagagtgacgtggaatgggaggat
ggagattccactcttcttaattgtgcatccacatctcttgctgaacctagtaataatgcc
tccaaaggtgctttggaagaagatgctgattttcaggaagcaattaggagaagtcttgag
gatataagggaacaaaaatctagtgatgcatcatgtgaagatgagaatttaaaagaagcc
agaagaatggctcatgagattaaaggtattcaagagaatggtaagcctgtgcctaacttg
ccccaagagaatactttgcaagtagataaaccatcatttgaggtggtcagtggggttgct
aggttagaagctgaggctggaatggatattttaagcacagatgattctcctgtggcaaca
tcaatggtagttgatactgacagcattgaaggactgctagacaaaccatttgaaaggtat
cctaaatgccatgctgaactttttcggcaagatacaattgaaggcggaaatttacttgga
ggaattggagataagaaatccgtccctcctattggagaacaggggttccacttggttgtg
gaggaagtgaaacccaatgctggcgtccaaatgtccacctctaccactaattttggtgta
agttctgagatttcggatatggtgtcaggtgaaacgcctcctgccatagctgctgatgct
cacgtaaatgtctttgaagctgcagcgcataacctggtagtagggacaccacagcagggg
gaatcttctgctaagggattaaggataaaccacgatgatgtacaaaagttgcccaacaaa
aatattcctgataacagtgctgagcagaaaggggatgaaaattttactcttgaggatgac
aaaataaagccgatggaagttacagaggctagtttggaggaggaaaggataaatctaagt
agagagcgtatagacctagaagatgagcagagaaggctcgagcgtaatgcagagtctgta
agcagtgaaatgtttactgaatgtcaggagcttcttcaaatgtttggcttgccatatatt
attgcaccaatggaagctgaagctcagtgtgcatacatggaactttcaaaccttgtagat
ggtgtggttactgatgactctgatgtgttcttgtttggggcacaaaatgtttacaagaat
atattcgatgaccgcaaatatgttgagacctacttcgtgaaggacattgagaaggagctt
ggcctaacacgagagcaactaatccgtatggccctgcttcttgggagtgattatactgaa
ggtgtaagtgggataggtattgttaatgctattgaagttatgaatgcatttcctgaggaa
gatggcctcactaaatttcgggagtggattgaatcaccagatccaaccattttaggaaag
ctcggtgtgcaaacaggatctagttcgaggaatagagggtcaaaagttggtgaagacact
gtgagttgctcaaatagcgatatggatggactctctgcacctgcacagactgttatgcaa
gcaatggacgacatccagaacacgaagcagatcttcatggataagcatagaaatgtgagc
aaaaactggcacattccttcatcttttccaaatgaagcagtaatttctgcttatgtttct
ccacaagtggacaagtcaacagagcctttctcatgggggaagccagatcttttctttctt
cgcaaattgtgttgggaaaagtttggatggaatacgcagaaggcggatgagttgctctta
cctgttttgaaggagtacaacaaacatgagactcaactgcggttggaagcattctacact
ttcaatgagagatttgcaaaaattcggagtaagaggattaataaagcagttaaaggaata
acagggaaaacatctgtcgaagaaagtagggatgacaagtcaggaaaatctgtaactgga
acagaggattgtatcacgagagatgaaagcaactcaacacacaaatcagctgtgaagttg
tcaaaaaaaagaaagaataaagagtctgagccatctgaagctaggaatattgatccagtg
atgcagacagaaggcaggaaaaataccaggcaaaaattgactgcaagaggcagaggccga
ggccgaggaagcgagagacgccaagctaatggaagaggtcggagaataaaaagttcatgg
cttgaagatggtgaaaacagttctgacagcgactgcattagtgagaatgaaaaagaaaag
caagacaaaaagttaggaagaccacgtgaattacggaagtcaactcgaactagaaatgct
gtgaagtacacttcggatgatgacgtggaaattgatgaaccgggtaaagcaagccacgat
gaagaaaactgcagcgatgaagaggccgtgaaagaaccttttgacgatcatcacttagtt
ggagatactgccgctagtactggtgaaaagaacccgcataaggaggagcactctagtggg
gactactttgaaatgggaggtggattctgctcgattgaagaacctgaactcaaaacagat
gaaccgagtgtaggtcaaaatggtgatccttcttttgaagttgaatcatttcaggaatac
cttaacatgggcggtgggttttgcttggacgaagatgaaacaaaagaggacccgcataaa
caggcttccgagccagctacagagttggtctctgatgactctgatccacattgttctaat
attggggaagaagctaacccaaagagaaggaaggcagatgcattatataacgagcagaat
tctgaccatttaactcctagagctagcaataatagtagctctcctccagaaagtatcgga
caagatgattctgggacaccaccaatgaaatctctgagtgccatgccttacttgagaaga
aagcgaaggaagagttga

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