Rhododendron vialii: 131304878
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Entry
131304878 CDS
T09330
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131304878
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
131304878
REST complex
131304878
Heterochromatin formation proteins
Other heterochromatin formation proteins
131304878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
COX5A
Motif
Other DBs
NCBI-GeneID:
131304878
NCBI-ProteinID:
XP_058188309
LinkDB
All DBs
Position
10a:complement(2758797..2771070)
Genome browser
AA seq
1355 aa
AA seq
DB search
MKRLRDDVHANSQFKRPFVSSRSESNGQPHIPGGGGGGGGGGGAQKLTTNDALSYLKEVK
DMFQDQREKYDMFLDVMKDFKAQRIDTTGVIARVKELFKGHNNLIFGFNTFLPKGYEITV
IEEEEAPAKRTVEFDEAISFVNKIKKRFQNDDHVYKSFLDILNMYRKEHKGITEVYHEVS
ALFTDQPDLLEEFTRFLPDTSATASVPQVPFSRHSFYRYDERSSVMAIPRQAPTDKQRRR
ERTTTPQTDRALSLDRSDMDDDKTVLKLQKDQRKRVEKDSRERRNRDQDFRESEHESNRK
FSMQHPHDKRKSARKVEDFGGNPALATYDDKDALRSMYKQEFVFCDKVKERLSSSDDYQT
FLKCLHIYSTEIITRVELHNLVLDLLGQYPDLMDGFNEFLERSENIDGFLAGVMNKKPLW
PEGRLSKSVKVDDKDKEHRRETDGAKEKDRYKEKYMGKSIQELDLSNRQCCTPSYRLLPE
DYPIPSASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLL
ECVSSAAKRVEELLNRLNDNSISSDSPIRFEDHFTALNLRCIERLYGDHGLDVMDILRKN
PSVALPVILTRLKQKEEEWNKCRSDFNKVWAEIYAKNHYKSLDHRSFYFRQQDSKNLSAK
SLVAEIKEIKEKTQKADDVVLAISAGSRHPISPHQEFAYSDTDLHEDLQKLIKYSCEEVC
TTKEQLNKVMRLWTTFLEPMLGISSWPRSSDVNEDVGTGRHHARGSTNSNSGEGDGSPGP
GLLSSKQSKPLCNGDGNKLPEQANSSKVSLGNGDTAAKDDSFHSEKERKILAKVDTVPGF
TTTVASSEQLAKANELLANVADSIHGRIMELTSGHAATPPGPSHGAVEGKNEARSNVDDA
PALQVVHVSRPVSFENGTSTEGTKVNRYHKDAVEPTKKEREEGELSPGGIHKTKLSAESM
HYQSGNGQEIGCPDGGGENDIDGDDEDSGNVSEGEDVSGSESAADGCSREEHEEDEDAEH
DEVDGKVESEGEAEGMPDGISTPLSENFLRTVKPLAKHVTSAFHDNVKKDSRVFYGNDSF
YVLFRLHQILYERLLSAKMFSTAAEMKYAMAKDANPSDLYGRFMGALYNLLDGSADNAKF
EDDCRAIIGNQSYVLFTLDKLIYKLVKQLQTVASDETDNKLLQLYEYEQSRTRENYVDAV
YYDNVHVVLHDENIYRFECSSSPSSFSIQLMDDGSDKSDVMAVSVDPNFAAYLHNDFLPV
VSCKKEPFGIFLQRSKRQYAGLDESSAICKAMEGVCVVNGLECKMACSSSKISYVLDTED
LFFRMKRQRCMSAGRSSGRYQAKVERFHRFLTTSL
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattacgagacgatgttcatgcgaattcgcaatttaagcggccgttcgtttct
tctcgctccgaatcgaatgggcagccccatattcctggcggaggaggtggcggtggcggc
ggaggaggtgctcaaaaactaacaaccaatgatgctttatcctacctcaaagaagttaag
gacatgtttcaagatcaaagagaaaaatatgacatgttccttgatgtcatgaaagacttt
aaggctcaaagaattgacactactggtgtcatagcgagggtgaaagaactattcaaaggg
cacaacaatctaatctttggctttaacaccttcttgccaaagggttatgaaattaccgtc
attgaggaggaagaggccccggcaaagagaactgttgagtttgacgaagctataagtttt
gtaaacaagataaagaaacgtttccaaaacgatgaccatgtatacaagtcatttctagat
atcttgaatatgtatagaaaggagcacaagggtattactgaggtctaccatgaggtttct
gcactttttactgaccagccagatttacttgaggagttcacgagatttttgcctgatact
tcagctacagcatccgtaccacaggttccattttcccgacattccttctatcgatatgat
gagcggagttctgtcatggccataccacggcaggcaccaacggacaaacaacgccgtcga
gagaggactaccactcctcaaacagatcgggctttgagtcttgaccgtagtgacatggat
gacgataaaaccgtgctgaaactgcaaaaggatcagaggaagcgtgtggagaaagatagc
agggagagaagaaatcgtgatcaggatttcagagaatctgagcatgagagcaataggaaa
ttcagtatgcaacaccctcatgacaaaaggaaatctgcccggaaggtggaagactttgga
gggaatcctgctctggccacttatgatgacaaagatgccttgagaagcatgtacaagcaa
gagtttgttttctgcgacaaagtgaaggagaggctgtccagttcagatgattaccagaca
ttcttgaagtgtcttcatatttacagcacagaaataatcacgagagtggaattgcacaat
ttggttttggatttacttggacaatatccagaccttatggatgggttcaatgaattcttg
gagcgttctgagaatattgatggattccttgctggagttatgaataaaaaacctttgtgg
cctgaaggccgtttgtccaaatcagtgaaggtagacgacaaagataaggagcacaggcgt
gaaactgatggagcaaaagaaaaagacagatacaaggagaagtatatgggaaaatccatt
caagaacttgacctttctaaccgtcaatgttgtactccgagctatcggcttcttcccgag
gattatcccataccttcagcaagtcagagatccgagcttggtgctcaagtgcttaatgac
cattgggtatctgtaacttcaggcagtgaggattactcttttaaacacatgcgcagaaac
cagtatgaagaaagcctgtttagatgtgaggatgataggtttgagcttgacatgttgttg
gagtgtgtgagctcagctgctaagcgagtggaggaattgttgaaccgccttaatgataat
tcaattagctcagatagtccaatccgttttgaagaccatttcacagctctcaatctaagg
tgtatagaacgtctatacggtgatcatggtctggatgtgatggacatattacgtaagaat
ccatctgttgcgttgcctgttatattaactcgtctgaagcagaaagaagaggagtggaac
aaatgccgttctgattttaacaaggtttgggctgaaatatatgctaagaaccactacaaa
tctcttgatcatcgcagcttctatttcaggcaacaggattcaaagaacttgagcgcaaaa
tccttggtggctgaaatcaaagaaattaaggagaaaacacagaaagctgatgatgtggtt
cttgctatatctgctggaagcagacatcctattagtccacatcaggagtttgcgtactct
gatactgaccttcatgaagacttacagaagcttatcaaatattcctgtgaagaggtttgc
acaacaaaagaacaattgaacaaggttatgaggctgtggactacctttttggagccaatg
ctgggtatttcttcttggcctcgcagttcagatgtaaatgaagatgttggaacgggcaga
catcatgctaggggaagtactaattccaacagtggagaaggtgatggtagtcctggtcct
ggtttgttgagctctaagcagtcaaaacctctctgcaatggggatggaaacaaactccca
gagcaagctaattcctccaaggttagtttgggaaatggtgatactgcggccaaagatgat
agtttccattcagagaaagagaggaagattttggctaaagtggatacagtgcctggattt
accactacagttgcttccagtgaacaattagcaaaagccaatgaattacttgctaatgta
gcagattccattcacgggcgaatcatggaactgacatcaggacatgctgcaactcctcct
ggacctagtcatggcgctgttgaaggtaagaatgaagcgaggtcgaatgttgatgatgca
cctgcactacaggttgtccatgtttcaagaccagtttcatttgaaaacggaacgtccaca
gagggtaccaaggttaacagatatcacaaggacgcagttgaacccaccaaaaaggagaga
gaagaaggtgagttatcgccagggggaatccataaaacaaagcttagtgcagaaagcatg
cattaccaatccgggaatggccaagagataggttgtccggatggtggaggagaaaatgac
atagatggtgatgatgaggatagtggaaatgtctctgagggtgaagatgtttctggcagt
gagtctgctgctgatgggtgctctagggaggaacatgaggaggatgaagatgcagaacat
gatgaagtggatggtaaagtagagagtgaaggtgaggctgaggggatgcctgatggcata
tcaacgccactgtcagaaaattttctccggaccgtgaagcctcttgcaaagcatgtcact
tcagcatttcatgataatgtgaagaaagattctagggttttttacggaaacgactctttt
tatgtgcttttcaggcttcatcaaatactgtatgaaaggttattgtcagcaaaaatgttc
tcaactgcagctgaaatgaaatacgcaatggcgaaggatgctaacccctctgatctgtat
ggcagatttatgggcgccctatacaacttgcttgatggatcagctgacaatgcaaaattt
gaggatgattgtcgggctattattggaaatcaatcttatgtgctatttacgttggacaag
ttaatatataagttggtgaaacagcttcaaacggtcgccagtgatgagactgataataag
cttcttcagttatacgagtatgaacaatctcggacgcgtgagaattatgttgatgcagtt
tattatgacaatgtacatgttgtccttcatgatgagaacatataccgatttgaatgttca
tcttccccatccagtttctccattcaactgatggatgatggcagtgacaagtctgatgtg
atggctgtttctgtggaccctaattttgcggcgtatttgcacaatgattttctgccggtc
gtttcctgtaaaaaggagccatttggtatctttctgcagagaagtaagcgccagtatgca
ggcctagatgaatcttctgccatatgcaaggctatggaaggtgtatgtgtggtcaatggt
ttggaatgtaagatggcttgcagctcatcaaagatctcctatgtcctagatacagaagac
ttgttcttccgaatgaaaaggcaaagatgtatgtcagccggcagatcttcaggccgttat
caggcaaaagtagaacgctttcacagatttttaaccacctcgttatga
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