Rhododendron vialii: 131305186
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Entry
131305186 CDS
T09330
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00040
Pentose and glucuronate interconversions
rvl01100
Metabolic pathways
Module
rvl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131305186
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
131305186
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
ParBc_C
Motif
Other DBs
NCBI-GeneID:
131305186
NCBI-ProteinID:
XP_058188372
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All DBs
Position
1a:48392758..48394705
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AA seq
260 aa
AA seq
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MALVRRFDEVAKITVFFVGLAALLFCGRADLVPTVFDVTKYGATGDGESENAQAFIQAWN
AACQSNGAAKVVIPPGTYLSGEVFFVGPCNCPKPIIVEVQGTVLAQTDLSEYPNGQWFSI
ADVDGLAVTGAGTFNGQGEASWQYDSCGRQTVCNSPLPPSIGFLNVNNTILEGVKLVNSK
GINIKVSDSHNLTFQNLDVTAPSNSPNTDGIHISNSDQITVKSCNIATGDDCISKGEGAT
NIVISAGRCTPGLGAGPLLH
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggccctcgtaagaaggtttgatgaagtagccaagattactgttttcttcgtgggccta
gcagctttgctcttttgtggtcgtgctgatcttgtgcctacagtttttgatgttaccaaa
tatggggctaccggagatggcgagtccgagaatgcacaggcatttatacaagcatggaat
gcagcatgtcaatcaaatggagcagcaaaagttgttattcccccagggacgtatctgtca
ggggaagtcttctttgttggaccatgtaattgcccaaagcctataattgtagaagttcag
ggtaccgtattagctcaaaccgatctcagtgaatacccgaatggtcagtggttttcgatt
gcagatgtagacggtttggcagttaccggtgcaggaacttttaacggccaaggggaggct
tcatggcaatatgattcttgtggtcgccaaaccgtatgcaactctcctctcccaccttcc
attgggtttttgaacgtgaacaatactattctcgaaggagtaaagttggtgaatagcaaa
ggaatcaacataaaagtttccgactcccacaacttgacattccaaaacctcgacgtaact
gcgccttccaatagcccaaacaccgacgggatccatataagcaactctgatcaaatcact
gtgaaaagttgcaacattgcaacaggcgacgactgcatctccaagggcgaaggcgctacg
aatattgtcatatccgccggtagatgtaccccaggacttggcgccggcccattacttcac
tag
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integrated database retrieval system
