Rhododendron vialii: 131306361
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Entry
131306361 CDS
T09330
Name
(RefSeq) chloride channel protein CLC-c-like isoform X1
KO
K05016
chloride channel 7
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rvl01009
]
131306361
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131306361
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rvl04040
]
131306361
Protein phosphatases and associated proteins [BR:
rvl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131306361
Membrane trafficking [BR:
rvl04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
131306361
Ion channels [BR:
rvl04040
]
Chloride channels
Chloride channel (CLC)
131306361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
131306361
NCBI-ProteinID:
XP_058188539
LinkDB
All DBs
Position
11a:complement(29258666..29266021)
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AA seq
783 aa
AA seq
DB search
MERRDANDLESEVGLGCDDEKVEKMERNGSSSFSERSVGGLREPLLLSRSRMNNTSQIAM
VGANVCPIESLDYEIIENDLFKQDWRSRNKVQIFQYVVLKWTLALLIGLSTGVVGFFNNL
AVENIAGFKLLLTNNLMLKEKYYGAFAAYAGSNMVLAIAAAALCAYIAPAAAGSGIPEVK
AYLNGVDAYSMLAPRTLFVKIFGSIFGVAAGFVVGKEGPMVHTGSCIANLLGQGGSRKYH
LTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFT
TAVVAVVLRSLIEVCRSGKCGLFGQGGLIMFDVNSAVPKYSTPDLLAIMLLGIIGGIFGS
LYNYLVDKVLRTYSIINERGPGFKILLVMTISFLTSCCSYGLPWLARCTPCPTGLEEECP
TIGRSGNYKNFQCPPGQYNDLASLLLNTNDDVIRNLFSSGNEEEVHLSTLFIFFVAIYCL
GIITYGIAIPSGLFIPVILAGASYGRLIGTLIVSISDLDVGLFALLGAASFLGGTMRMTV
SLCVILLELTNDLLMLPLVMLVLLISKTVADCFNNGVYDQIVKMKGLPYLEAHAEPYMRH
LVARDVVSGPLISFSGVEKVGTILHTLKITNHNGFPVIDEPPFSDAPELCGLVLRSHLLV
LLKRKKFTKKRVLSGSEILSKFHASDFAKPGSGKGLKLEDLDVKEEEWELYVDLHPITNT
SPYTVVETMSLAKAAVLFRELGLRHMCVVPKTPARPPIVGILTRHDFMPEHILGLYPHMN
PHK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagagatgcgaatgatctggagagcgaggtgggattggggtgcgacgacgag
aaggtggagaagatggagaggaacgggtcgtcgtcgttttcggagaggagcgtaggaggg
ttgagggagcctctgcttctgagcaggagtcggatgaacaatacgtctcagattgctatg
gtcggggctaatgtctgccccattgaaagcctcgattacgagattattgaaaatgatctt
ttcaagcaggactggagatctaggaacaaggttcagatatttcagtatgttgttctaaag
tggacacttgcacttcttataggattgagtacaggagttgtgggattctttaataacctt
gctgttgagaacattgccggttttaagcttctgcttactaacaatctcatgctcaaggaa
aagtattatggggcattcgcagcatatgctggtagtaacatggttttggcaattgccgct
gcagccctctgtgcttacattgctcctgcagcagccggatctggcataccagaggtcaaa
gcctatcttaacggtgttgatgcttattctatgttggctccacgtaccctatttgtaaag
atttttggttccatatttggagttgctgctgggtttgttgtgggcaaggaaggacccatg
gtacacactggctcttgtatcgccaacttacttggacaaggaggttcacgcaagtaccat
ttgacttggaaatggctcagatacttcaaaaacgatagggatcgacgggatttgatcacc
tgtggcgctgctgctggtgtagctgctgccttccgtgccccagttggcggagttttattc
gctcttgaagaagcagcttcatggtggcggagtgctcttctttggaggacttttttcaca
acagctgtagtcgctgtggtgttgagatctctaatagaagtttgtcgaagtggaaaatgt
ggactgtttgggcaaggaggtctgattatgtttgatgtcaattcagcagtgcctaaatat
agcaccccagatctattggccattatgttacttggaattatcggaggcattttcggaagc
ctttacaattatcttgttgacaaggttcttcgtacttatagcatcatcaatgagagaggt
ccgggattcaaaatcctacttgtcatgaccatctcctttctgacctcttgttgctcttac
ggcctcccatggcttgcaagatgcaccccatgtcctactgggctggaagaagaatgccca
accataggtcgctccggaaactacaagaacttccaatgtcctccaggccagtacaatgac
cttgcctccctcctcctcaataccaatgatgatgtcatccgtaacttatttagctccggc
aatgaagaggaagttcacctctctacactctttattttctttgttgccatatactgcctg
ggcattatcacgtatggcatagccattccatccgggctcttcatccctgtcatacttgcc
ggagcctcctatgggcgcctcattgggaccctcatagtctccatctctgatctcgatgtt
gggctcttcgcgcttcttggggccgcttcttttcttggtgggaccatgagaatgaccgtt
tcgctctgtgtcatacttcttgaactcacaaatgacctattaatgctccctctggtgatg
ctagttctccttatttcaaaaacagtggctgattgtttcaacaatggcgtttacgaccaa
atagtgaaaatgaagggactcccgtacttggaagcccatgctgaaccatacatgaggcac
ttggtcgctagggatgttgtttccggtcccttgatttcattttctggtgtcgagaaagtt
ggcactatactacacacgctgaagataacaaatcataacggattccctgtgattgatgaa
ccgcctttctcagatgcgccggagttgtgtgggctcgttttgaggtcccacttgcttgtt
ttgcttaaaaggaagaaatttaccaagaagagggtgttgagtggatcagagattttgagc
aagtttcacgcgtccgactttgcaaagccggggtcagggaaaggtctcaagcttgaggat
ttggatgtcaaggaggaggagtgggagttgtacgttgatctccatccaattactaatacc
tccccctatacggtagtggagacaatgtctctagccaaagctgcagtcctgttccgggag
cttggtctcaggcacatgtgtgttgtgccaaaaacccctgctagacctccaatagtagga
atcttgacaaggcatgacttcatgccggagcacattttgggactttacccgcatatgaac
cctcacaaataa
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