Rhododendron vialii: 131306398
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Entry
131306398 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131306398 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvl03016
]
131306398
Enzymes [BR:
rvl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
131306398
Transfer RNA biogenesis [BR:
rvl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
131306398
Prokaryotic type
131306398
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF835
Motif
Other DBs
NCBI-GeneID:
131306398
NCBI-ProteinID:
XP_058188589
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Position
11a:29698671..29706059
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AA seq
391 aa
AA seq
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MTDEKKPTASISDNSNHSLDQRPESPQRPPKIPRISVEEDGDRGDFEQPKEPILVDDTMS
QKNPRLQRYLVAIEYIGTRFAGAQKQPNDRTVVGVLEEAFHKFIGQPVSIFCSSRTDAGV
HALSNVCHVDVERISKRRPGEVLPPHEPAVVRRAVNHFLQKNEGDIMVIDVRCVTPDFHA
RYKAQERTYFYRLLSGPEPLSIFEKDRAWHVPEELDILAMQRACRVLVGHHDFSSFRAAS
CQAKSPIRTLDEISVTEVVSTPYFPSLRDREVSISTGDSLLALPTAAKIDPLDLISEEEK
VINPNGESNCEFGMRRRHHCYVVTTRACSFLYHQVRLLVGVLKCVGTGELTISDVERILN
AKSVTAASPMAPACGLYLGRVKYDLSSDMST
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgagaagaaaccaacggcctcgatctctgacaactccaaccactcgctcgat
caacggccggaatctccccagcggcctccgaagatccccagaatctccgtcgaagaggac
ggggacagaggagatttcgaacaaccgaaagagccaattctcgttgacgatacgatgagc
cagaaaaaccctaggttgcagcggtacttggttgcgatcgagtacatcgggactcgattc
gccggggctcagaaacagcccaacgacaggacagtcgtcggtgtactcgaggaagcgttt
cataaatttattggacagccagtttcaatattttgctcaagccgaactgatgctggagta
catgccttatcaaatgtttgccatgtagatgtggaacgtataagcaaaaggagacctggt
gaagtgttaccacctcatgaacctgccgtggttagaagagctgtaaatcatttcttacag
aagaatgagggagatataatggtgatagatgttcgatgtgttacgcctgattttcatgct
agatataaagctcaagaacgcacgtacttctatcgcttgctgtctggaccagagcctttg
tcaatctttgagaaagatcgtgcttggcatgtgcctgaggagctagatatcctagctatg
cagagagcgtgcagggttcttgtaggacaccatgatttcagttccttcagggcagcttcc
tgtcaggcgaagtcacctatcagaactttagatgaaatcagtgtgaccgaggtagtttca
actccatattttccttcactccgagatagggaagtaagcatttccacgggggatagtttg
cttgctttgcccactgcggcaaagattgatcctcttgatttgatttccgaagaagaaaaa
gtaataaatcccaatggtgaatccaattgcgaatttggcatgaggagaagacatcattgc
tatgtggtcactacaagggcatgctcctttctgtaccaccaggtccgcttgctagttgga
gttctcaaatgcgttggcacgggagaacttactatttctgatgttgagcgcatcctgaat
gcaaagtcagttacagcggcgagtcccatggctccggcatgtggtctctaccttggaaga
gtgaaatacgatttgtcctcggacatgtcaacataa
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