Rhododendron vialii: 131306412
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Entry
131306412 CDS
T09330
Name
(RefSeq) oligoribonuclease-like
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rvl
Rhododendron vialii
Pathway
rvl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131306412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131306412
03009 Ribosome biogenesis [BR:
rvl03009
]
131306412
Messenger RNA biogenesis [BR:
rvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
131306412
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-60S particles
RNases
131306412
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Dicer_PBD
Motif
Other DBs
NCBI-GeneID:
131306412
NCBI-ProteinID:
XP_058188614
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Position
11a:29856382..29861719
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AA seq
253 aa
AA seq
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MTETCKMNQLANSFSLLELDVGDDREVTIVRDHQENANGRGKGKKKGDSSAGMTLSKNNN
GVPQSVEVVSGDYKLPLVWIDLEMTGLNVEFDRILEIACIVTDGSLTKSVEGPDLVINQS
KECMDRMGEWCQTHHAASGLTKKVLRSKISEQEAEKQVTEFVRTCVGTHTPVLAGNSVYM
DFLFLKKYMPNLAGLFSHVLVDVSSVRSLCIRWYPRENKKAPVKDKKHRALDDIRESIAE
LKYYKEHIFKTKK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacatgtaaaatgaatcagcttgcaaattcattttctttgcttgaattggat
gttggagatgatcgagaagttactattgttcgtgatcatcaagaaaatgctaatggaaga
ggtaaaggtaagaaaaaaggtgacagctctgctggcatgaccctctcaaagaataacaat
ggggtcccacaaagtgtagaagtggtttcaggagactacaagttgccccttgtgtggatt
gatttggaaatgacaggtctcaatgtggaattcgatagaatattggagattgcctgtata
gttacggatggtagtttaacgaaatcagttgagggtcctgacttggttatcaatcaaagt
aaagaatgtatggacagaatgggagaatggtgtcagactcatcatgcagcaagtggattg
acaaaaaaggtactccgcagtaagattagtgaacaagaagctgaaaagcaggttactgaa
tttgtgaggacatgtgtaggcactcatacgccagttcttgccggaaattcagtttatatg
gattttctgtttttgaagaagtatatgccaaatttggccggcctgttctctcatgtactt
gttgatgttagcagcgtcaggtctctatgcattcgttggtacccaagagaaaacaagaag
gctcctgtgaaggacaagaagcatagagcattggatgatatcagagaaagcatagcagag
ctcaagtactacaaggagcatatattcaagactaagaagtga
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