Rhododendron vialii: 131306447
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Entry
131306447 CDS
T09330
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131306447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131306447
03036 Chromosome and associated proteins [BR:
rvl03036
]
131306447
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131306447
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131306447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
131306447
NCBI-ProteinID:
XP_058188657
LinkDB
All DBs
Position
11a:complement(28259676..28266012)
Genome browser
AA seq
894 aa
AA seq
DB search
MVIVGDRAVPMTSTFGSTHFRPSAFGSQCGGSRVSGYSKTVEVVDGEMMVSTGPQHLESI
SAMPVYKDNSTEELRWEDYKSGDKGGIGFGAWAMQPNLFSASCLSAKSASNPFSSSTPAN
IFASEAGASASEGFGESNTPAFSSFSPFGHSSSIPFSSDFGASTAPAPSSTPFQASAWPF
ATTSSSTPMPSGKPSASGLFGPNRSEPSLCTSSLPTFGPTPAVFSSSGSFSANCYGTSTQ
PIFGGNNKSSEFFGGEPISSMSSHFGSVPPNFVSPSLFGQATAQVPVSQSVAPSFGISGG
RCCVCPSNMSNTAFTGNGSTSAGNLFSSTQFEFPPNLSGFGHATTSSPSPFKPMQTVPCT
GVPIGDFGQSVHGTGVPVGNFGQSVPGFNGFLGIAFLPCWIAFGQPVASPPGWVASAQPI
AAPVTCNNPFHREVPGAPTYGSTNFGSSAFASKHGGSRIEAYKATVDLVDFGKLNSISAM
PIYRNKSPEEIRLEDYQSGDKGGPTLRMGSVHTAPSSFSSSTPSNLFASQKPTFTCQKFG
VPTTPIFGSSGFAAPSGECQFGQSFATPFSSTSANLFGCQTSVFNSADLASSTPFGPRPF
GQPSANPFSSSTSTNSFAASQTPSFASAAFGTSTTTPLASSVFAAPSSPSPFGLSVNPFS
STPSNTFPPKTSSFSSSGFGESTACPFTTAPSTLWGFGTASGFGSGANGSAPSFIESSSP
TFGSSPSVCSSSFTFGTSSQPVSGSHSYPLFGTLNSSVSSLFGSVAPNSVSPSSSGPITA
QSLFHAKCHPSFQKTHPFSGQSNIPLTPSFIPSFGALNISSTASTGNGSEGNLCSSPTSA
AGFDPTSSSTHTPFQPVPTADSEGVCLGNIGRSVAGDGFGWNAFGPPGAANCRF
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgtcggtgatcgagctgttccaatgacttcaacatttggaagcactcatttt
agaccttcggcctttggtagtcagtgtggaggaagtagagtatctggctattctaaaaca
gttgaggtagtagatggcgaaatgatggtatcaactggaccgcaacacttagaatccata
tcagccatgcctgtttacaaagataacagcactgaagaactccggtgggaggactacaag
tcaggagataaaggtgggattggctttggtgcttgggctatgcagccaaacctctttagt
gcttcatgtttgtcagccaagtcagcttcaaatcccttctcctcctcaacccctgccaat
atatttgcttccgaagcaggagcctctgcttctgaaggctttggagaatcaaatacccct
gcattcagttcattcagtccttttgggcattcatcttcaattccgttctcctcagacttt
ggagcatcaactgcgcctgcacccagttcaactccctttcaggcgtctgcatggcctttt
gcgactacatcatcgtctacgccgatgccatctggaaaaccctcagcctctggattattc
gggcccaatagatctgaaccttctttgtgtacatcaagcttacctacatttggaccaaca
cctgctgtctttagttctagcgggtcattcagtgcaaactgttatggaacatctacccaa
cctatatttggaggtaataataaaagctctgaattttttggtggtgaacccatctcgtct
atgtcatctcattttggatcagtacccccgaactttgtgtcaccctcattatttggacaa
gctactgcccaagtcccggtatctcagtctgttgcaccctcattcggtatttcaggtggc
cgctgttgtgtatgtccatcaaacatgtcgaacactgcattcactggaaatggatccaca
tccgcaggaaatttgttctcaagcacgcaatttgagtttccaccaaatctgtctggtttt
ggtcacgcaactacttcttcccccagtcctttcaagccaatgcaaactgttccttgcaca
ggtgttcctatcggtgactttgggcagtcagttcatggcacaggtgttcccgtaggcaac
tttggccagtcagtaccgggttttaatggctttctgggcatcgcattcctgccttgctgg
attgcttttggtcaaccagttgcttcacctcctggttgggttgcctcagctcagcctatt
gctgcacctgtgacttgtaacaatccgtttcacagagaagtacctggggccccaacatat
ggaagcactaattttggatcgtcagcctttgctagtaagcacggaggaagtagaatagaa
gcctataaggcaacagttgacctagtagattttggtaagctaaattcaatatcggccatg
cccatataccgaaataagagccctgaagaaatccgattggaagactaccagtcaggggat
aaaggtggtcctacactcaggatgggctctgttcatactgctccaagttccttctcctcc
tcaaccccctccaatttatttgcttcacaaaaaccaacctttacttgccaaaaatttggt
gtgccaactactcctatattcggttcatcaggttttgcagcaccatctggtgaatgtcaa
tttggccagtcatttgcaactcccttctcttcaacttcagccaacttatttggttgccaa
acatccgtgtttaattccgcagacttggcgtcctcaactccattcggtccacgtcctttc
ggccagccatctgcaaatcccttctcctcttcaacctctaccaattcatttgctgcttcc
caaacaccatccttcgcttcggcagcctttggaacatcgactactactccgttagcttcg
tcagtttttgcagcaccatcctctccatctccttttgggttatctgtaaatcccttctcc
tcaaccccttccaatacgtttcctcctaagacatcgtctttcagctcttcaggctttgga
gaatcaactgcgtgcccttttacgactgcgccatctacactttggggatttggaacggca
tcaggctttgggtctggggccaatggctctgcaccttctttcattgaatcaagctcacct
acatttggatcatcgccttctgtctgcagttctagtttcacatttggaacatcttctcaa
cctgtgtccggatcacatagctatccactatttggaacactcaactcatctgtctcctct
ctatttggatcagtagccccaaactctgtgtcaccctcatcatccggacccatcactgcc
caatccttgtttcacgccaagtgtcatccctcatttcagaagactcatcctttttctgga
cagagtaatattcctttgacgccaagtttcatcccttcctttggtgcattaaacatttcc
agcactgcatcaactgggaatggctctgaaggaaatttgtgctcaagtcctacaagcgct
gctggttttgatccgacgagtagctctacgcacactccttttcagccggtgccaactgct
gattccgaaggtgtttgtttaggcaacattggccggtcagtagcaggggatggctttggt
tggaatgccttcggtccaccaggtgctgcaaattgtagattttga
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