KEGG   Rhododendron vialii: 131306539
Entry
131306539         CDS       T09330                                 
Name
(RefSeq) SART-1 family protein DOT2 isoform X1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
rvl  Rhododendron vialii
Pathway
rvl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131306539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rvl03041]
    131306539
   04121 Ubiquitin system [BR:rvl04121]
    131306539
Spliceosome [BR:rvl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    131306539
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    131306539
Ubiquitin system [BR:rvl04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    131306539
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 131306539
NCBI-ProteinID: XP_058188823
LinkDB
Position
1a:15586472..15599739
AA seq 914 aa
MVRELSESRRSRSIDSRDRDDSPAGRERWEGKHDDSEEKDHRSKHRSSKSSRMREDKDRR
SKDRERSKDREREGNDREKDRSTTKDKRSERDYDLEKYKDKRSERDKDSKDRGKERDRER
DREAEKDKERVKEKSREREKGREKERDAAKYRDRDRERKGGDRESEIDKDRDRDRDTVDR
EKGKGRREKERELDQDKERSRERDNKAGRKHQEGHDRGKDGGKDDGLKLDREGGQNGDVT
NQRKSSRHDEDETRSTKYQQSAAGQLGGSNLSASEVEDRISKMKEERLQKKSEGASEVLA
WVNRSRKIEEKKSYEKEKALQLSKIFEEQDNINQGELEDEGVAQHTARDLAGVKVLHGLD
KVIEGGAVVLTLKDQSILADGDINEEMDMLENVEIGEQKQRDEAYKAAKKKTGIYVDKFS
DEPGSERKILPQYDDPIVDEGVTLDASGRFTGDAEKKLEELRKRIHGVSANIHFEDLSTS
DKITSSDYYTHEEMVQFKKPKKKKSLRKKEKIDLDALEAEAVSAGLGVGDLGSRNDGRRK
AIKEEQERLEAEMRSNAYQAAYAKADEASKALRLQQTSTVKTEDDDDTPIFGDDDDLHKS
LERARKLALKKQGEVAASGPQAIALLAASTASHSTADDQNATSGETQENKVVFTEMEEFV
WGLQLDEEAHKPDGEDVFMEEDIAPKALDQETKDENGGWTEVKDTDKEEHAADDDKEEIL
PDETIHETAVGKGLSGALKLLKDRGTLKETVEWGGRNMDKKKSKLVGIYENDGQKEIRIE
RLDEFGRLLTPKEAFRLLSHKFHGKGPGKTKQEKRIREYHEELKVKQMKNSDTPSESVER
MREAQARLKTPYLVLSGNVKPGQTSDPSSGFATVEKDLPGGLTPMLGDRKVEHFLGIKRK
GEPGDMGPPKKPKM
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggtcagagaattgtcagaatcgaggcgttcgagaagtatcgacagtagggaccgagac
gattctccggcggggcgagagagatgggaaggaaaacacgatgattcggaagagaaggat
cacaggagtaagcatcggagtagtaagagcagccgaatgagggaagacaaggatcgtaga
agtaaggaccgggaacggtcgaaggaccgagagagggaaggcaatgatcgcgaaaaggat
aggagtactacgaaagataagaggagtgagagagattatgatttggagaagtacaaggat
aagaggagcgagagagataaagacagtaaggatcgagggaaggaacgggatagagagagg
gatagggaggcggagaaggataaggagagggtgaaagagaagagcagggaaagggagaaa
gggcgggaaaaggagagagatgcggcgaaatacagggaccgggacagggaacggaaaggt
ggtgatagagaaagcgaaatcgacaaggatagggatagggatagagacacggttgatcga
gagaagggaaaggggaggagggagaaggagagggagttggatcaagataaggagaggtct
agagaaagagataataaagcgggtcggaaacaccaagagggtcatgacaggggtaaggat
ggaggaaaagatgatgggttgaaattggaccgtgaaggaggtcagaatggggatgtaact
aatcagaggaagagttctcgtcatgacgaggatgaaaccaggtccactaagtatcaacag
agtgctgctggccaattgggtggatcaaacctatcagcttcggaggttgaagatcgcatt
tcaaagatgaaggaggaaagactgcagaaaaaatctgaaggagcttctgaagtgctcgca
tgggttaataggagccgcaaaattgaggagaaaaaaagttatgagaaggagaaggccttg
cagctttcaaagatttttgaggagcaggacaatatcaatcagggagaactcgaagatgag
ggtgtagcccagcatactgcccgagacttagctggggttaaagttcttcatgggcttgac
aaagtaattgaaggtggtgcagttgtgttgacactcaaagatcagagcatacttgctgat
ggtgacatcaatgaagagatggacatgcttgaaaatgtggaaattggggagcaaaagcag
agagatgaggcttacaaggctgcaaagaagaaaacgggaatttatgttgacaagttcagc
gatgagccgggttctgaaaggaaaatactcccacagtacgatgatcctattgtagatgag
ggggtaactctggatgcaagtggacgtttcactggtgatgcagagaagaaactagaggag
ctccgaaaaaggatacatggtgtttcagcaaacatccattttgaagacctaagtacttct
gataaaatcacatcatcggattattacactcatgaagaaatggttcagtttaaaaagccc
aagaaaaagaaatcattgaggaaaaaggagaagatagacctagatgcccttgaagcggaa
gctgtgtctgctggattgggagttggggatcttggttcacggaatgatgggaggaggaag
gccattaaagaggagcaagagagattggaggctgaaatgagaagcaatgcttatcaagcc
gcatatgctaaagctgacgaggcatccaaagcactgagactgcagcaaactagcactgtc
aaaacagaggatgatgatgatactccaatatttggggacgacgatgatctccataaatca
ttagaaagagctagaaaattagctctcaagaagcaaggtgaggtggcagcatctggtcct
caggccattgcactcctggctgcttcaactgctagccattcaactgcagatgaccaaaac
gccacttctggggagacgcaagaaaacaaggttgtcttcacggagatggaagagtttgtg
tggggtcttcaacttgatgaagaagctcataagccagatggtgaagatgtcttcatggag
gaggatatagcaccaaaagccctggatcaagaaacaaaagatgagaatggtggttggaca
gaggtaaaagatactgacaaagaggaacacgctgctgatgatgacaaagaggagatactt
ccagatgaaacaattcatgaaacagctgtagggaagggattatctggtgctcttaaactg
cttaaagaccgaggaacactcaaagaaactgttgaatggggtggcagaaatatggacaag
aaaaagagcaagcttgttggcatatatgagaacgatggacaaaaagagatacgaattgaa
aggctagacgagtttggacgacttttgactccaaaggaagccttccggttgctttcacac
aaattccacgggaaggggcctgggaaaacaaaacaagaaaagcgcatacgtgaataccac
gaggaactgaaggtaaagcaaatgaagaattcagatacaccatcagagtctgtggagagg
atgagggaagctcaagctcgattaaagacaccctatcttgttctcagtgggaatgtcaaa
ccagggcaaacaagtgatcctagcagtggttttgcaactgttgagaaggatcttcctggg
ggattgacgcccatgcttggagacagaaaggttgagcacttcttgggaataaagcggaag
ggtgagcctggagatatgggcccgccaaagaagcctaaaatgtag

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