Rhododendron vialii: 131306955
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Entry
131306955 CDS
T09330
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131306955
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rvl00535
]
131306955
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
131306955
Meiosis-specific proteins
Cohesin complex and associated proteins
131306955
Proteoglycans [BR:
rvl00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
131306955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
Microp_apicomplexa_7
Motif
Other DBs
NCBI-GeneID:
131306955
NCBI-ProteinID:
XP_058189390
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All DBs
Position
1a:complement(38391328..38422298)
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AA seq
1203 aa
AA seq
DB search
MYIKQVIIEGFKSYKEQVATEPFSSKVNCVVGANGSGKSNFFHAIRFVISDLFQNLRSED
RHALLHEGAGHQVLSAFVEIVFDNTDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VTNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEFTIYDKEIRDAKQKLE
EVEEARRKVSEQSTERYNSVLDAHEKSKELDKTFKDLTKEVQILGKEKEAIHNQREEAIK
KYTKLELDYEDLKESISGDKRAKDDAVKQLEILQKEIQDSQEELNKIRPLYNNQVREEED
ITRGIMEREKKLSILYQKRGRATQFANKADRDKWLQREIDEYERVLSSNLTQEEKIKDEI
QQLNADIQVQDAYILHRQTEIADLESVLSHYCETFNQLKSQRDKLQDERKSLWGKESELS
GEIDRLKTEVVKAEKNLDHATPGDIRRGLNSVRRICRESGILGVFGPIIELVDCDEKFFT
AVEVTAGNSLFHVVVETDEISTQIIRHLNALKGGRVTFIPLNRVKAPQITYPQSSDVIPL
LKKLKFKRDYTPAFAQVFGRTVICRDLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFY
DYRRSKLKLMNVIKENTNSVNKKEAELEEVRFKLQEIDQKITELVAEQQKNDAKHAHDRS
EREQLKEDIANARKQKESISKALEKKEKLLANVRTQIGQLKANISMKQDEMGTELVDHLT
LEEKDLLQRLNPEITELKETLIACRANRIETETRKAELETNLSTNLVRRRQELEAVKVSG
ETDKLDAEAEAKKQELADATLLVEDVTQQLKRVTGSIDERTRQLGKIKDEKNKLKSLEES
YQNTLQDEAKELEQLLSNRNILVAKKEEYSKKSRELGPLSSDAFDVHRRRNIKELHKMLH
RCNEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIE
RTFKGVAKHFREVFSELVQGGHGFLVMMKKKDGDQGDDDQDEDAPRVADMEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMANTQFITTTFRPELVKVADKIYGVKHKNRVSNVEVISKEEALNFIEHDQS
HNV
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggttattattgaaggctttaagagctataaagagcaagttgctact
gagccttttagttcgaaagtaaattgtgttgttggcgcaaatggatctggcaaatcgaat
ttttttcatgctattcgatttgtgataagtgacctcttccaaaacttgcggagtgaagat
aggcatgcattactccatgaaggtgctggacaccaagtgttgtctgctttcgtggagatc
gtatttgataatactgacaatcgcatccctgttgataaggaggaggttcgcttgcggaga
accatcggccttaaaaaggatgaatattttttagatggaaaacatatcacgaaaacagaa
gttacaaacttacttgaaagtgctgggttctctcgctccaacccttactatgttgtgcag
caagggaaaatagcatctttgacattgatgaaagactctgagcgactggatctgctgaaa
gaaattggaggaacacgagtttatgaggaaagacgcagggagagtttgaaaattatgcaa
gaaactggtaataagagaaagcaaataattcaagttgttcagtatttggatgagagatta
aaggagcttgatgaagagaaagaggaattgagaaaatatcagcagcttgacaagcaacgg
aaatctctagaatttaccatttatgacaaagaaattcgtgatgcgaaacagaaattggaa
gaggtagaagaggctcgacgcaaggtttctgaacagtcgaccgagaggtataactctgtg
ttagatgcccatgaaaagtccaaggagttagacaagacattcaaagatttgacaaaagaa
gttcaaattttgggcaaagagaaagaagcaatacataaccagcgagaagaagctattaaa
aagtacacaaagcttgagcttgattacgaagatctaaaggagagtatttctggagataag
agagctaaggatgatgcagtgaaacagcttgagattctgcagaaagaaatacaggattca
caagaggagcttaataaaattagacctttgtacaacaatcaagtcagagaggaggaggac
ataacaagaggtataatggaacgtgagaagaagcttagcattctttaccaaaaacgtggt
cgggccacccagtttgcaaataaagctgatcgtgacaaatggctacaaagggaaattgac
gaatatgaacgagtcctgtcttcaaatctaacacaggaggagaaaattaaggatgaaatt
caacagcttaatgctgatattcaagtacaggatgcctacattttgcatcgccaaactgaa
atagcagatttagaatctgtcttatctcattattgtgaaactttcaatcagctcaaatcc
cagagggacaagctgcaggatgagcggaagtccttgtgggggaaagaaagtgaactttct
ggcgagattgatagactaaagacagaagttgtgaaggcggaaaaaaacttagatcatgct
acacccggtgatattaggagaggtctgaattcagtgaggaggatatgtagagagagtggg
attcttggagtatttggtccaattattgagttggtcgattgtgacgaaaagtttttcact
gccgttgaagttactgctggaaacagtttgtttcatgtggtggttgaaacggatgaaata
tcgacgcagataattagacaccttaatgcattgaaaggcgggagagtcacatttatacca
cttaacagggtgaaggcgccacagattacctatccacagagttctgatgtgatacctctc
ctaaagaaactgaaattcaaacgtgattatactccagcttttgctcaggtatttggtaga
actgtaatctgccgagatttggatgtggccacaagagtcgcccgcactgatggtttggac
tgcataactttggaaggtgatcaagtcagcaagaaaggtggtatgacagggggattttat
gactataggcgctcgaaactgaagcttatgaacgtcataaaagagaatacaaattcagtt
aacaagaaggaagctgaactcgaggaagttcgtttcaagcttcaagagatagatcagaaa
atcacagaacttgttgctgagcagcagaaaaatgatgccaagcatgctcacgacagatct
gaacgggaacagcttaaggaggacattgctaatgctaggaagcagaaagaatccatttcc
aaagctctagagaaaaaggaaaagttgcttgcaaatgtgcggacccaaattgggcagctt
aaagccaatatatctatgaaacaagatgaaatgggcacggagcttgttgatcacttaaca
ttggaggaaaaggatttgctacaacgactgaatcctgaaataactgagctgaaagagacg
cttattgcctgcagggcaaatcgcatagagaccgaaacaagaaaagcggagcttgagact
aatctgtcaacaaaccttgtaaggagaagacaagagctggaggcagttaaagtgtctgga
gaaactgataagttagatgctgaagctgaagcaaagaagcaggagctagcagatgctacg
ttactagttgaagatgtgacccagcagctcaaaagagtcactggaagtattgatgagcgc
acaagacaacttgggaagatcaaagatgagaagaataagttaaagtcattggaggaatcc
tatcaaaatacacttcaggatgaagctaaagagctggaacaactgttgagtaacagaaat
attcttgttgcgaagaaagaagagtactcaaagaaaagcagggaattgggtccattatca
tcagatgcttttgacgtgcataggaggaggaacataaaagaattgcataaaatgcttcac
aggtgcaatgagcagctacaacagttcagccatgtaaacaagaaagcacttgatcaatat
gtgaacttcacagaacagcgagaagaactccagaaaaggcaagctgaattggatgcaggt
gatgagaaaattagagaacttatatccgttttggatcaacggaaggatgagtccattgaa
cgtactttcaaaggtgtggctaagcattttcgggaagtattctctgaactggtgcaaggt
ggccatgggtttttagttatgatgaagaaaaaggatggtgatcaaggtgatgacgatcag
gatgaagatgcccctcgtgtagctgacatggaaggaagggttgagaaatacattggcgtg
aaagtgaaggtttcttttactgggcaaggggagacacagtcaatgaagcagttgtctggg
ggtcagaaaactgtggtggcattgacactaatctttgccatacagcgttgtgatcctgct
ccattttatctttttgacgagattgatgctgcacttgatcctcaatatagaactgctgtt
gggaatatgatccgtcggttagcagacatggcaaatacacagttcatcaccacaacgttc
cggccagagcttgtgaaagttgctgacaagatatatggcgtgaaacacaaaaacagggtt
agcaatgttgaagtcatctctaaggaagaagctttgaactttattgagcacgatcagtct
cataatgtttga
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integrated database retrieval system