Rhododendron vialii: 131307330
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Entry
131307330 CDS
T09330
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic
Organism
rvl
Rhododendron vialii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
CMS1
YgbB
zf-CCHC_2
zf-CCHC_4
ERCC3_RAD25_C
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
131307330
NCBI-ProteinID:
XP_058189768
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Position
11a:28299009..28306577
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AA seq
771 aa
AA seq
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MARSSSIIPVSTTLSLPFSSSAFTKATAAHFRPKPQSGAVSFVASAVASTNNSVLSDEAF
KRLGLFDEDSLNVRDDDDDGGFGSKIGRTASSGAAGSDDGVELAVSNLGLPQRLVEALKK
RGITELFPIQRAVLAPALEGRDLIARAKTGTGKTLAFGIPILKRLSEDERSFQRHGRLPR
MLVLAPTRELANQVEKELKESAPYLKTVCVYGGVSYNTQQNALSRGVDVVVGTPGRLMDL
IKSKSLQLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPAQRQSMLFSATMPFWVKKLAR
KYLDNPLTIDLVGDSEEKLVEGIKLYALPATATSKRTILADLVTVYAKGGKTIVFTQTKR
DADEVSLALTSSITSEALHGDISQHQRERTLNGFRKGKFTVLVATDVAARGLDIPNVDLV
IHYELPNDPETFVHRSGRTGRAGKEGSVILMFTSSQRRTIKTLERDVGCKFEFISPPSVE
DVLEASAEQVVATLNGVHPESVEFFTPTAQKLIDEKGTGALAAAIAQLSGFSQPPSSRSL
ITHEKGWVTLQLTRDPVFSRGFFSARSVTGLLSDVYSSAAGEVGKIHLIADEKVQGAVFD
LPEEIAKELLNKELPPGNTISRITKLPTLQDDGPPTDYYGRFSNRDRGFRGGSRGQRGFS
NSRGWDRDSNEDEGRFGNRRGGRSNRSNSSWSSSPRESSRDSADDWLIGGGRSGRSRDSS
RDSASDWLIGGGRSGRSSSYANRDRDSFGGACFNCGRSGHRASDCPTKKGF
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctcctcctccatcatacccgtttccaccacactctccctccccttctcctcc
tccgccttcaccaaagccaccgccgcccatttccgccccaaaccccaatccggtgccgtt
tcatttgtcgcgtcggccgtcgcgagcacgaataactcggtcctgagcgacgaggcgttc
aagaggctggggttgttcgatgaagactctctgaacgtcagagacgacgacgacgatggc
ggcttcggctctaaaattgggagaacggcgtcgtccggtgctgctgggagtgacgacgga
gtcgaacttgctgtttcgaacttagggcttcctcagaggctcgtcgaggctctcaagaaa
cgagggattacggagctattccccatccaaagagctgtgctagcacctgcattggaaggt
cgagatcttattgctcgtgcaaagactgggacagggaagacattagccttcggaatacca
atacttaaacggcttagtgaagatgaaaggagttttcagaggcatggacgacttcccaga
atgttggttcttgcacctactagggaattagcaaaccaagtagaaaaagaactcaaagaa
tcggctccgtatttgaagactgtttgtgtctatggaggagtttcttataatacacagcaa
aatgcactttcccgtggagttgatgtggtggtgggaactcctggtagactcatggatcta
ataaaaagtaaaagcctgcaactgggtgaagtcgagtatttggtgcttgatgaagctgat
caaatgcttgcggtaggcttcgaggaggatgtggaagtgattttagaaaagcttccagca
cagaggcagagtatgcttttttctgcaactatgcctttttgggtgaagaaactagccagg
aaatatttggacaatcctttgacaattgatttggttggtgacagtgaggaaaagctggta
gaggggatcaagctgtatgccctcccggccactgcaacttcaaagcgtaccattcttgct
gatcttgtaacggtctatgccaagggagggaagacaattgttttcacgcagacaaaacgt
gacgcagatgaagtttctctcgctttgacaagtagcattacttcagaggcactgcatggt
gacatatcacaacaccagagggagagaactttaaatggttttaggaaagggaaattcacg
gtgcttgttgccactgacgttgcagctcgtgggcttgatatccccaatgtggatttggtt
atccactatgaattgccaaatgatccagagacttttgtgcatcgctctggtcgtacggga
cgagcaggaaaagaaggcagtgttattttaatgttcactagtagccagaggaggacaatc
aaaacacttgagcgcgatgttggatgtaagtttgagtttattagcccaccatctgtggaa
gatgttttagaggcatcagctgagcaagtggtggctaccctaaatggagttcatcctgag
tctgtggagttcttcaccccaactgctcaaaagttgattgacgaaaaaggcacgggtgct
cttgctgctgccatagcacaactgagtggcttttcccaacctccatcgtcccgatctcta
attacgcatgagaagggatgggtaacgttgcagctaacacgtgatcctgttttttctaga
gggttcttttctgctagatccgtaactggactattgtcagatgtttattcttcggccgct
ggtgaagtaggaaaaatacacttaattgcagatgaaaaggttcaaggagcagtttttgat
cttccagaggagatcgcaaaagaattactgaataaggagctaccacctggaaacactatt
tccagaattaccaagttgcccactttgcaagatgatgggcctccaactgattactatgga
aggttttctaacagggataggggtttccgaggaggttctaggggacaaagaggtttcagt
aactcacgaggatgggatcgagattctaatgaggacgaaggcaggtttggtaataggcgc
ggtggtcggagcaacagaagcaacagtagttggtctagtagcccaagagagagttcaaga
gacagtgcagatgattggttaataggcggtggacggtctgggcggtcaagagatagctca
agagacagtgcaagtgattggttaataggcggtggacggtctgggcggtcatcatcctat
gcaaatagggacagagacagctttggcggtgcatgtttcaactgtgggcggtctggccat
agggcatcggattgtcctaccaagaaaggtttttag
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