Rhododendron vialii: 131307484
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Entry
131307484 CDS
T09330
Name
(RefSeq) protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1
KO
K28146
NHL repeat-containing protein 2
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99994 Others
131307484
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Gene cluster
GFIT
Motif
Pfam:
NHL
Hydrolase
HAD_2
Thioredoxin_8
Redoxin
TEN_NHL
AhpC-TSA
SGL
Thioredoxin
Hydrolase_like
DUF5128
Thioredoxin_2
Fn1-VW_OTOGL
HAD
Motif
Other DBs
NCBI-GeneID:
131307484
NCBI-ProteinID:
XP_058189983
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Position
11a:26785002..26805797
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AA seq
1087 aa
AA seq
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MALRALQTPQSKLSTFFHISRPTVRTTPLLRWGSRALVLPQQRRPRRSVAVACVKLEDEE
KVSEKTGSEWGKVSAVLFDMDGVLCDSEEPSRRAAVDVFAEMGVQVTVDDFVPFMGTGEA
NFLGGVASVKGVEGFNPEAAKKRFFEIYLNKYAKPNSGIGFPGALELITQCKRKGLKVAV
ASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAASKILNVPISECIVIE
DALAGVQAAKAAQMRCIAVTTTLAEETLKTASPALIRQDIGSVSVDDILCGGSSCHNEKM
QGSHLPNSSGQTSAALLVDVTASRPIMGINSANNEVFSIGGLQGSRRDIVRYGSLGIAIS
CLVFTITNWKAMQYASPKAVWNSLFGVSNSPSFGQNEGADLCGSGSARVQQFVNYISDLE
TRGTASIVPEFPSKLDWLNTAPLKLNRDLKGKVVLLDFWTYCCINCMHVLPDLEFLEKKY
KDMPFTVVGVHSAKFDNEKDLEAIRNAILRYGITHPVVNDGDMSLWRELGVNSWPTFVIV
GPNGKLLAQISGEGRRKDLDDLVEAALLFYGRKKMLDSKPIPLSLEKDNDPRLLTFPLKF
PAKLAVDVLNNRLFISDSNHNRIVVTDLDGNFIIQIGSTGEEGFHDGSFEDAAFNRPQGL
AYDAKKNLLYVADTENHALRVINFVDEMVGTLAGNGTKGSDYKGGGRGTTQLLNSPWDVC
FEPVNEVVYIAMAGQHQIWEHNTLDGVTRAFSGDGYERNLNGSSSTSTSFAQPSGISLSP
DLKEAYIADSESSSIRALDLKTGGSRLLAGGDPFFAENLFKFGDHDGAGSEVLLQHPLGV
LCGRDGQIYIADSYNHKIKKLDPASKRVSTVAGTGKAGLKDGMAQVAQLSEPSGIIEAQN
GRLFIADTNNSVIRHLDLNKEEPELLTLELKGVQPPIPKSRSLKRLRRRSSADTDTVKVD
GSSSIEGNLYLKISVPEGYHFSKEARSKFSVEIEPENQVVINPVDGYLSLEGFASLHFRR
SSPSASMGRINCKVYYCKEDEVCLYQSLSFEVPFQEVIPDSKPAEIALTYLVKPKTSTGS
LQLPVAR
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgagagctttacaaacccctcaatcgaaactcagcaccttcttccacatctca
agaccgaccgtaagaactacccctctgctccgatgggggtcaagagccctggttcttccg
caacagcggcgaccgcggcggagtgtggccgtggcgtgtgtgaaattggaggacgaggag
aaagtgtcggagaagacggggagcgagtgggggaaggtgtcggcggtgctgttcgacatg
gacggagtgctgtgtgacagcgaagagccctcgaggagggctgcagtcgacgtgtttgcc
gaaatgggagtccaagtcaccgtcgatgacttcgtgccgttcatgggcactggtgaggca
aacttcttagggggtgttgcttcagtgaagggtgttgaagggttcaaccctgaggcagcg
aagaaaaggttttttgagatatatctcaataagtatgcaaagccaaactccggaatagga
ttccctggtgcccttgaactcattactcagtgtaaaaggaaggggctcaaagttgctgtt
gcatctagtgcagaccgaatcaaggtcgacgcaaatttagcggctgctggtctaccattg
tcaatgtttgatgctattgtatcagcagatgcatttgagaatttgaagcctgctcctgat
atatttttggctgcatcgaagattttgaacgtgcccattagtgagtgtattgtcattgaa
gatgctttagctggagtgcaagctgccaaagcagcacaaatgagatgtatagctgtgaca
acaacattagcagaagagactctaaaaacagccagccctgcacttatcagacaggatata
ggaagtgtttcagttgatgatatcctctgtggtggctctagttgccataatgagaagatg
caggggtcccacttacctaattcttctggacaaacttcagcagcattgctcgtggacgta
acagcgagtaggcccattatgggtataaattctgcaaataatgaggtcttctccattgga
ggattgcagggttcacggagagatattgtaagatatggaagtttgggtattgccatctct
tgtcttgttttcaccattacgaactggaaggcaatgcaatatgcatctccaaaagccgta
tggaattcgctatttggagtcagcaacagtccctcttttggacagaatgaaggtgctgac
ctttgtggatccggttctgctagagtccaacaatttgtgaactacatatctgatttggaa
accaggggaaccgcttctattgtgccggagtttccatcaaaacttgattggctaaatact
gctccccttaagctaaacagggatttgaaaggaaaagtggttcttctcgatttttggacc
tactgttgtattaactgtatgcatgtcctgccggatctagagtttttggagaaaaaatac
aaagatatgccttttaccgttgtcggagtgcactctgcaaagtttgataatgagaaagac
ctagaagctatccggaatgcaatcctacgatatggaattactcatcctgttgtcaatgat
ggagatatgtccctgtggcgagaactaggtgtcaattcatggcctacatttgttattgtg
gggcccaatggtaagctccttgcgcaaatatcaggtgaaggtcgccgaaaggatcttgat
gatttagtggaagcagctcttctgttctatggtagaaaaaaaatgttggacagcaaacct
attcctttgagtctggagaaggacaatgatccgcgtttattgacatttcccttgaagttt
ccagcaaagctagcagttgacgtcctcaacaaccggcttttcatttcagacagtaatcat
aaccgcattgtggttactgacctagatgggaatttcattatccaaattgggagcacagga
gaggaaggttttcatgatggtagctttgaagatgctgcctttaaccggccacagggtctt
gcttatgatgcgaagaaaaatctgctttacgtagctgatactgaaaaccatgcgttgagg
gtgattaattttgttgatgagatggtggggacacttgctggaaatggaaccaaaggttct
gattacaaagggggaggaaggggaactactcagctcctcaattctccatgggatgtctgc
tttgagccagtcaatgaggttgtttacattgcaatggctgggcagcatcagatttgggag
cataatacgttggatggtgttacaagagctttcagtggtgatggttatgagagaaacttg
aatggttcaagctctacaagtacatcatttgcacaaccatctggaatttccttatcacct
gatttgaaggaggcatatattgctgatagtgaaagtagctctattagagcactggatctg
aaaacaggaggatcaagattactagccggtggtgatccattttttgctgagaatttgttc
aagtttggagatcatgatggtgcggggtctgaagttcttcttcaacatccattgggtgtc
ttgtgtgggagggatggtcaaatttatattgccgactcttataatcacaagatcaagaag
ttggatccagcaagtaaaagagtgtctactgtagcaggtacaggcaaagccggtctcaag
gatgggatggcccaagtagctcagctttcagagccatcaggaatcattgaggcacaaaat
ggaaggcttttcattgctgatacaaacaatagtgtaattcgacatctagacctgaacaag
gaggaacctgaactccttactttagagctgaaaggagttcagcctcctataccaaaatcg
agatcattgaaacggcttagacggcgatcatcagcagacacagatacagttaaagttgat
gggagttcatccattgagggcaacttataccttaaaatatctgtgccagaagggtaccat
ttctcaaaggaagcacgtagcaagtttagcgtagaaattgagcctgaaaatcaagtggtt
attaatccagtggatgggtacctcagcctagaaggatttgcatcacttcattttagaaga
tcatccccttcagcttccatggggagaattaattgcaaggtttactactgtaaggaggat
gaggtctgtttataccagtctcttagctttgaagtgcctttccaagaggttattccagac
tctaaaccagcagaaattgcacttacgtatcttgttaagcccaaaacttccacgggcagc
ttgcagcttccggttgctcgctga
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