Rhododendron vialii: 131307594
Help
Entry
131307594 CDS
T09330
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131307594
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Meiosis-specific proteins
Others
131307594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
RNA_helicase
AAA_14
Motif
Other DBs
NCBI-GeneID:
131307594
NCBI-ProteinID:
XP_058190179
LinkDB
All DBs
Position
11a:9674918..9687892
Genome browser
AA seq
826 aa
AA seq
DB search
MEDDAAERSCFVIGLIENRAKGVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLQFYDPM
VIVVPPNKFAPDGMVGVSILVDRFYSSIKKVVMARGCFDDTKGAVLVKNIAAKEPSALSL
DTYYKQYYLCLAAASATIKWTEAEKGVIITNHSLLVTFNGSFDHMNIDATSVQNLEIIDT
LHSALWGTSNKKRSLFHMLKTTRTVGGTRLLRANLLQPLKDIETINARLDCLDELMSNEQ
LFFGLSQVLRKFPKETDRVLCHFCFKPKKVTNEVLGIDNARKSQILISSVILLKTALDAL
PLLSKVLKDANSFLLGNVYISVCKNDKYASIRKRIGEVIDEDVLHARVPFVAQTQQCFAV
KAGIDGLLDISRRSFCDTSEAIHNLANKYREDFKFPNLKIPFNKRQGFYFSIPHKDIKGK
LPSKFIQVMKHGNNVHCSTLELASVSFATTNYHVLHTQFLVYGLQMELLRIWDYKNSQLN
VRNKSAAAECYIRTELCLEALVDAIREDVSMLTLLAEVLCLLDMIVNSFAHTITTKAVDQ
YIRPQFTDNGPLAIDAGRHPILESIHNDFIPNNTFLSEASNMIIVMGPNMCGKSTYLQQV
CLIVILAQIGCYIPAQYGTIRVVDHIFTRMGAVDNLESNSSTFMTEMKETAFIMQNVSQR
SLIVMDELGRATSSSDGFAIAWSCCEHLLPLKAYTIFATHMENLSELATIYPNAKILHFH
VDVKSNRLDFKFQLMDGPRRVPHYGLLLAGVAGLLSSVVETARSITARITEKEVKRMEVN
CMQYRDIQMVYRAAQRLICLKYSSQDEDSIREALQNLKESYINGSL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgcagcagagcgatcgtgctttgtaatcggtttgattgagaatagagca
aagggggttggagtggctgcctttgacttgaggtcagcttcgctccatctgtctcaatac
attgaaactagcagttcatatcagaacacaaagacattactgcaattttatgacccaatg
gtgattgttgttccacctaataagtttgcgcctgatggtatggttggagtctcgatacta
gtggacagattttattcatcgattaagaaggtcgtaatggctcgtggttgctttgacgac
accaagggagctgtgctggttaaaaatatagcagccaaggaaccatcggcactcagtttg
gatacttactacaagcaatattatctctgcttggctgcagcttctgcaactatcaagtgg
actgaagcagagaaaggcgtcatcattacaaaccactcgttgttggttacttttaacgga
tcatttgaccacatgaatattgatgccactagcgtccagaacttggaaattattgatacg
ctgcattctgctctatggggaacaagcaacaaaaagagaagtctattccacatgctgaag
acaacaagaactgttggagggactagacttctccgggccaatcttttgcagccgctaaaa
gatattgaaactatcaatgctcgacttgattgcttggatgaattgatgagcaatgagcaa
ctattcttcggtctctcccaggttcttcgtaagtttccgaaagaaaccgatagggtcctt
tgtcatttttgcttcaagccaaagaaagttacgaatgaggtcttgggcattgataatgct
agaaagagccaaattttgatttcaagtgttattctccttaaaactgctctggatgcattg
ccgctattgtcaaaggtgctcaaggatgcaaacagttttcttcttggaaatgtttacata
tcagtatgcaagaatgataaatatgcttcaataagaaaaagaattggagaagttattgat
gaagatgtgcttcatgcacgggttccttttgttgcgcaaacacaacagtgttttgctgtt
aaggctggaatagatggactacttgatatttcaaggaggtcattttgtgacaccagtgaa
gctatacacaaccttgcaaacaaatatcgtgaagatttcaagtttccaaatttgaaaatc
ccgtttaacaagaggcagggattttactttagcattccacataaggacataaaaggaaag
cttccaagcaagtttattcaggttatgaaacacgggaacaatgtgcactgttcaactctg
gaacttgcttcagtgagttttgctacaaccaattatcatgtccttcatacacagttttta
gtctatggactgcaaatggaactactcagaatctgggactacaaaaattcacaattaaat
gtgaggaacaagtctgctgctgctgaatgctatatacggacagaactttgtctggaagcc
ctagtggatgccatacgggaggatgtctctatgcttaccctgctcgctgaggtcctatgc
cttctagatatgattgtgaactcatttgctcataccataaccactaaggctgttgatcaa
tatattaggcctcaatttacagataatggcccattggcaattgatgctgggagacaccct
atcctcgaaagcatacacaatgacttcattcccaacaataccttcctttcagaagcgtca
aacatgataattgtcatgggcccaaacatgtgtgggaaaagtacttatcttcaacaggtg
tgtctgatagtcatcctcgctcagattggttgttatattcctgcccagtacgggactata
agggtagttgatcatatatttacaaggatgggagctgtggacaatcttgagtcgaactct
agcacgtttatgacagagatgaaagagacggcctttataatgcagaatgtctctcaaagg
agtctgatcgttatggatgaactgggaagggctacttcttcatctgatggatttgcaatt
gcatggagctgctgtgagcatcttttaccactcaaagcgtataccatatttgccactcac
atggaaaacctatcagaattagctaccatctaccccaatgccaaaattcttcactttcat
gttgatgtcaaaagcaatcggttggatttcaagtttcaactcatggacggaccgcgacgt
gtaccgcactatggtcttctgttagcaggagtggctggtctactgagctcagtagttgaa
acagccagaagcatcacagcaaggattacagaaaaggaagttaagagaatggaagtaaac
tgcatgcagtatcgtgatatccagatggtctaccgtgctgctcaacggctgatatgcttg
aaatactccagccaagacgaagattcaatcagagaagcactgcagaatcttaaagagagc
tatataaatggaagcctttaa
DBGET
integrated database retrieval system
