Rhododendron vialii: 131307946
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Entry
131307946 CDS
T09330
Name
(RefSeq) protein CHROMATIN REMODELING 35 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rvl
Rhododendron vialii
Pathway
rvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131307946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131307946
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
131307946
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
131307946
NCBI-ProteinID:
XP_058190691
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Position
11a:37244423..37253997
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AA seq
914 aa
AA seq
DB search
MFPLVIVIAVSVTLCACLHAWKVLIHGESEISCYKFQLMYYKRRLKGMRCRAQEPGQKKA
RTDNSDPFAVPNLLEELNCSRFGSVTDEIKDLLARRSQAINSYFRMHSTDLDVEKKLTKE
ESQEKQLETPLALPDVILLEDNSVADHAVTGRLEVVHIDSDVEETGDQRRLEVVHIDSDV
EEKGDQRPFNPYREPAAEFLVDDFLDRDWTQNQSNDDPRLSGETETKKDKGVYVGVEDDI
QSEDSNCQTDSNYDGLADIWKEMNVAFECCKDTTEDPLPDELVREGLDECDHTFVLKDDL
GYVCRICGVIQRGIETIIEYQYAKGARTTRTYWYEGQSMKDMEPTEILRDGVKLSGQDFI
VSEISVHPRHRKQMKPHQVAGFNFLLSNLVAENPGGCIMAHAPGSGKTFMIISFIQSFLA
KYPNARPLVVLPRGILAIWKKEFQRWQIEEIPLYDFYSARADNRSQQLEVLKKWEDHKSI
LFLGYKQFSSIVCDNETNKTSATCQELLLTCPSILILDEGHTPRNEDTDVLNSLKKVRTP
RKVVLSGTLYQNHVKEVFNIFDLVRPKFIRWDTSRAIMRRILSRVSRKNVKVKGLENAFY
EAVECTLQKDDDFKRKISVIQDLREMTSKVLHFYKGDFLDELPGLVDFTVLLDLSPRQKL
EVEDLKKIGKKFKISSDGSALYVHPQLRYPLKKSSSRERERPDDTEMDQLLEKVEVREGV
KAKFFLNLLGLCESGGEKLLVFSQYLQPLKFLERLVVKVKGWSLGKEIFVITGDSNSENR
EWSMDCFNTSTDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQV
KKVYTYRLVAAESPEEEDHSTCSKKESISKMWFEWNECCGHKEFEMQSVNVNDCGDLFLE
SPKLSEDVKALYKW
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgttcccccttgtcatagtaatagctgtctctgtaactctgtgcgcgtgcttgcatgcg
tggaaagtacttattcatggtgaaagcgagataagctgctataagttccagttaatgtat
tacaagagacgccttaagggaatgagatgtcgtgctcaagaacctggacagaagaaagca
agaactgataattctgatccatttgctgttcctaatttgctggaggagctgaattgtagt
agatttggaagtgtgaccgacgaaataaaggatcttcttgctcggaggagccaggcgatc
aattcttattttcgaatgcattccactgatttagatgtagagaagaagctaacaaaagag
gaatcacaagagaagcagctggagactcctttggctcttccggatgtaattctcttggag
gataacagtgttgcagatcatgctgtaactggaagattggaggttgttcatatcgattcg
gatgttgaagagacaggagatcagagaagattggaggttgttcatattgattcggatgtt
gaagagaaaggagatcagagaccctttaacccatatcgggagccagctgcggagtttctc
gtggacgattttttggatagggattggactcagaaccaaagcaatgatgatccaagactt
tctggtgaaactgagaccaagaaagacaaaggtgtttatgttggtgtagaggatgatatc
caaagtgaggacagcaattgccaaactgattctaattatgacggtctggctgatatttgg
aaggaaatgaatgtggcatttgaatgttgcaaggatactactgaagatcctctacctgat
gaacttgtaagagaggggctagatgaatgtgaccatacttttgtgttgaaggatgatctt
ggttatgtttgccgaatttgtggtgtgatccagagaggaatcgaaaccataattgagtac
cagtacgcaaagggtgcaaggactacacgaacatattggtatgaaggccagagtatgaag
gacatggaacctactgaaatccttcgtgatggggttaaattgtcaggacaggatttcatt
gtcagcgaaatctctgttcatcccagacataggaagcaaatgaaaccccaccaagtggcg
ggcttcaatttcctactgagtaacttggttgcagagaacccaggtggctgcatcatggcc
catgctccaggctctggaaaaacttttatgataataagtttcatacagagttttcttgca
aagtatcccaatgctagaccactggtggtactaccaagaggcatcttggctatatggaag
aaagaatttcaaagatggcaaattgaggaaattccgctctatgacttttactccgcaagg
gcggataatcgttctcagcaactggaagtgctcaaaaaatgggaagatcacaagagcatt
ctctttcttgggtataagcaattttcttctattgtatgcgataatgaaacaaacaagact
tctgctacttgccaagagttattgttgacatgtccatccattctcatattggacgaaggt
catactcctagaaatgaggacactgatgtcctgaactccctcaagaaagtccggaccccg
cggaaagttgtactttcgggcactctttatcagaatcatgtgaaagaggtgttcaacatt
tttgaccttgttcgtcctaaatttattaggtgggatacttcccgtgccattatgaggcgg
atcttgagcagagtgtccaggaaaaatgtgaaagtaaaaggtttagaaaatgctttctat
gaagctgtagagtgcacgctgcagaaggacgatgatttcaagaggaagatatccgtgatc
caagacttgcgtgaaatgacgagcaaggttctccatttttacaagggagatttccttgat
gaattacctggacttgttgatttcactgtgcttcttgatctcagcccaagacagaagctt
gaagttgaagatttgaaaaagataggaaagaagttcaaaattagttctgatggaagtgca
ctttacgtacacccacagttgagataccccttgaagaagtcttcatccagagaaagagag
agacccgatgatactgagatggatcaactattagaaaaggtggaagttagagaaggggtg
aaggcaaagttctttcttaatctgttagggttatgtgaatctggtggtgagaagctgctg
gtttttagccagtatctccagccgctcaaattcttggaaagacttgtggtgaaagtgaag
ggatggagtctaggaaaagaaattttcgttatcaccggtgactccaattccgaaaataga
gagtggtccatggattgctttaatacgtccactgatgctagggttttctttggttcaata
aaagcatgtggggaagggatatctctagttggtgcctctcgtatcattatacttgacgtc
catttgaatccatcagttacccgccaagcaataggtcgggcattccgaccaggtcaagtg
aagaaagtatacacttacaggttggttgccgctgaatcaccggaagaggaagaccactct
acttgctctaaaaaggagtccatttcaaagatgtggtttgaatggaatgaatgctgtggt
cacaaagagtttgaaatgcagtctgtcaatgtgaacgactgtggcgacctcttcttggaa
tcccccaagttgagtgaagatgtaaaagctctgtataaatggtaa
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