KEGG   Rhododendron vialii: 131307946
Entry
131307946         CDS       T09330                                 
Name
(RefSeq) protein CHROMATIN REMODELING 35 isoform X1
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rvl  Rhododendron vialii
Pathway
rvl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    131307946
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rvl03400]
    131307946
DNA repair and recombination proteins [BR:rvl03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     131307946
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII SWI2_SNF2
Other DBs
NCBI-GeneID: 131307946
NCBI-ProteinID: XP_058190691
LinkDB
Position
11a:37244423..37253997
AA seq 914 aa
MFPLVIVIAVSVTLCACLHAWKVLIHGESEISCYKFQLMYYKRRLKGMRCRAQEPGQKKA
RTDNSDPFAVPNLLEELNCSRFGSVTDEIKDLLARRSQAINSYFRMHSTDLDVEKKLTKE
ESQEKQLETPLALPDVILLEDNSVADHAVTGRLEVVHIDSDVEETGDQRRLEVVHIDSDV
EEKGDQRPFNPYREPAAEFLVDDFLDRDWTQNQSNDDPRLSGETETKKDKGVYVGVEDDI
QSEDSNCQTDSNYDGLADIWKEMNVAFECCKDTTEDPLPDELVREGLDECDHTFVLKDDL
GYVCRICGVIQRGIETIIEYQYAKGARTTRTYWYEGQSMKDMEPTEILRDGVKLSGQDFI
VSEISVHPRHRKQMKPHQVAGFNFLLSNLVAENPGGCIMAHAPGSGKTFMIISFIQSFLA
KYPNARPLVVLPRGILAIWKKEFQRWQIEEIPLYDFYSARADNRSQQLEVLKKWEDHKSI
LFLGYKQFSSIVCDNETNKTSATCQELLLTCPSILILDEGHTPRNEDTDVLNSLKKVRTP
RKVVLSGTLYQNHVKEVFNIFDLVRPKFIRWDTSRAIMRRILSRVSRKNVKVKGLENAFY
EAVECTLQKDDDFKRKISVIQDLREMTSKVLHFYKGDFLDELPGLVDFTVLLDLSPRQKL
EVEDLKKIGKKFKISSDGSALYVHPQLRYPLKKSSSRERERPDDTEMDQLLEKVEVREGV
KAKFFLNLLGLCESGGEKLLVFSQYLQPLKFLERLVVKVKGWSLGKEIFVITGDSNSENR
EWSMDCFNTSTDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQV
KKVYTYRLVAAESPEEEDHSTCSKKESISKMWFEWNECCGHKEFEMQSVNVNDCGDLFLE
SPKLSEDVKALYKW
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgttcccccttgtcatagtaatagctgtctctgtaactctgtgcgcgtgcttgcatgcg
tggaaagtacttattcatggtgaaagcgagataagctgctataagttccagttaatgtat
tacaagagacgccttaagggaatgagatgtcgtgctcaagaacctggacagaagaaagca
agaactgataattctgatccatttgctgttcctaatttgctggaggagctgaattgtagt
agatttggaagtgtgaccgacgaaataaaggatcttcttgctcggaggagccaggcgatc
aattcttattttcgaatgcattccactgatttagatgtagagaagaagctaacaaaagag
gaatcacaagagaagcagctggagactcctttggctcttccggatgtaattctcttggag
gataacagtgttgcagatcatgctgtaactggaagattggaggttgttcatatcgattcg
gatgttgaagagacaggagatcagagaagattggaggttgttcatattgattcggatgtt
gaagagaaaggagatcagagaccctttaacccatatcgggagccagctgcggagtttctc
gtggacgattttttggatagggattggactcagaaccaaagcaatgatgatccaagactt
tctggtgaaactgagaccaagaaagacaaaggtgtttatgttggtgtagaggatgatatc
caaagtgaggacagcaattgccaaactgattctaattatgacggtctggctgatatttgg
aaggaaatgaatgtggcatttgaatgttgcaaggatactactgaagatcctctacctgat
gaacttgtaagagaggggctagatgaatgtgaccatacttttgtgttgaaggatgatctt
ggttatgtttgccgaatttgtggtgtgatccagagaggaatcgaaaccataattgagtac
cagtacgcaaagggtgcaaggactacacgaacatattggtatgaaggccagagtatgaag
gacatggaacctactgaaatccttcgtgatggggttaaattgtcaggacaggatttcatt
gtcagcgaaatctctgttcatcccagacataggaagcaaatgaaaccccaccaagtggcg
ggcttcaatttcctactgagtaacttggttgcagagaacccaggtggctgcatcatggcc
catgctccaggctctggaaaaacttttatgataataagtttcatacagagttttcttgca
aagtatcccaatgctagaccactggtggtactaccaagaggcatcttggctatatggaag
aaagaatttcaaagatggcaaattgaggaaattccgctctatgacttttactccgcaagg
gcggataatcgttctcagcaactggaagtgctcaaaaaatgggaagatcacaagagcatt
ctctttcttgggtataagcaattttcttctattgtatgcgataatgaaacaaacaagact
tctgctacttgccaagagttattgttgacatgtccatccattctcatattggacgaaggt
catactcctagaaatgaggacactgatgtcctgaactccctcaagaaagtccggaccccg
cggaaagttgtactttcgggcactctttatcagaatcatgtgaaagaggtgttcaacatt
tttgaccttgttcgtcctaaatttattaggtgggatacttcccgtgccattatgaggcgg
atcttgagcagagtgtccaggaaaaatgtgaaagtaaaaggtttagaaaatgctttctat
gaagctgtagagtgcacgctgcagaaggacgatgatttcaagaggaagatatccgtgatc
caagacttgcgtgaaatgacgagcaaggttctccatttttacaagggagatttccttgat
gaattacctggacttgttgatttcactgtgcttcttgatctcagcccaagacagaagctt
gaagttgaagatttgaaaaagataggaaagaagttcaaaattagttctgatggaagtgca
ctttacgtacacccacagttgagataccccttgaagaagtcttcatccagagaaagagag
agacccgatgatactgagatggatcaactattagaaaaggtggaagttagagaaggggtg
aaggcaaagttctttcttaatctgttagggttatgtgaatctggtggtgagaagctgctg
gtttttagccagtatctccagccgctcaaattcttggaaagacttgtggtgaaagtgaag
ggatggagtctaggaaaagaaattttcgttatcaccggtgactccaattccgaaaataga
gagtggtccatggattgctttaatacgtccactgatgctagggttttctttggttcaata
aaagcatgtggggaagggatatctctagttggtgcctctcgtatcattatacttgacgtc
catttgaatccatcagttacccgccaagcaataggtcgggcattccgaccaggtcaagtg
aagaaagtatacacttacaggttggttgccgctgaatcaccggaagaggaagaccactct
acttgctctaaaaaggagtccatttcaaagatgtggtttgaatggaatgaatgctgtggt
cacaaagagtttgaaatgcagtctgtcaatgtgaacgactgtggcgacctcttcttggaa
tcccccaagttgagtgaagatgtaaaagctctgtataaatggtaa

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