Rhododendron vialii: 131307949
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Entry
131307949 CDS
T09330
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
131307949
Enzymes [BR:
rvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
131307949
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Toxin-deaminase
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
131307949
NCBI-ProteinID:
XP_058190696
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Position
11a:37171156..37175647
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AA seq
657 aa
AA seq
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MGSGSMSPPGVKLQIQDHHVVIDNGILQVTLSKPEGMVTGISYKGIDNLLEVKNGETKRG
YMVVVWDSLDGRKQPPQWIFGTKFEVIKETEEQVEVSFSRTWDSSLKGKLVPLNVDKRFI
VLRGSSGFYWYAICEHLGLPEWPAFGLNVAMNAFVLLKEKFHYMAVADNRRRFMPLPDDR
DLKRCQPLAYEEAVLLVDPKEPEFKGQVDDKYQYSCDNKDLRVHGWISMASPDSPPVGFW
QITPSDEFRTGGPLKQNLSSHVGPTCLAVFISPHYAGEDLELKIGQGEAWKKVFGPVFVH
LNSVEGGKSGDEALTLWEGAKRQMMAEVQSWPYTFPESDDFPSSDQRGNVSGRLVVRDRY
ISKDYISANGAYVGLAPPGDVGSWQRECKGYQFWTRTDEHGYFSINHIRTGDYNLYAWVP
GFIGDYRKDNVVTITPGCHIPLGNLVYEPPRDGPTLWEIGIPDRSAAEFYVPDPDPKYIN
PLFVNHPDRFRQYGLWERYAELYPKEDLVYTVGVSDYRKDWFFAQVTRRKNDNTYQGTTW
QIKFKLDMVDQTGTYKLRVALAAANLGELQVRVNDPNPTRPLFSSGLIGRDNVVARHGIH
GLYWLFNVEIPNAALVKGEYNTIYLTQPRGQSSLQNLMYDYIRLEGPPTKGHQMSYL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggttctggatcaatgtcacctccgggggtgaaactgcagattcaagatcaccatgtg
gtgatcgataacggcatccttcaagttacactatcgaagcctgagggcatggtcactgga
atcagttacaaaggcatcgataatttgctcgaggtcaagaacggtgaaactaaaagaggt
tacatggtggttgtttgggattcacttgatggacgcaaacaacctccgcaatggattttc
ggaacaaagtttgaagtaataaaggaaacagaggaacaagtggaggtgtccttctcaaga
acatgggattcttctctcaagggcaagcttgtccccctgaatgtagacaaaaggtttata
gtgcttcgcggttcctcaggcttctactggtatgccatttgcgaacatttaggtttgcca
gaatggccggctttcggccttaatgtggccatgaatgcattcgtgctcctaaaagagaag
tttcactacatggcagtggcagataataggcgaaggtttatgccgttgccagatgatcgg
gacctcaaaagatgtcaacccctggcatacgaagaagctgtcctccttgtcgaccctaaa
gagcccgagtttaaaggacaggtggatgacaagtatcagtattcatgcgataacaaagat
ctccgtgtccacggttggatatccatggcgtctcctgactctcctcccgtgggcttctgg
caaattacgcccagcgatgagttccggacgggtgggcccctcaaacaaaacctttcctcc
catgtgggtcccacttgccttgctgtgtttatcagtcctcactatgctggggaagatctc
gagctgaaaattggacagggcgaggcgtggaagaaagtttttggtcccgttttcgtacat
ctcaattctgtggagggtggaaaatctggggatgaggcacttacgctatgggagggtgcc
aaaagacagatgatggccgaagtccaaagctggccctatacttttccagaatccgatgac
tttccatcatcagatcaacgcggcaatgttagtggtagattagtcgtacgagacaggtac
ataagcaaggattatatatcagcaaacggtgcctatgtcgggttggcccctcctggggat
gttggatcatggcagagagaatgcaagggctaccaattctggacgagaacagatgagcat
ggctatttttccatcaaccatatacgtaccggtgactacaatctttacgcatgggttcct
ggatttattggagattatcgaaaagataatgttgtcaccataacaccaggctgtcacatt
cccttgggtaatcttgtgtatgagcctcctagagatggacctacgttgtgggaaattggc
attcccgatcgctctgctgcagaattttacgtacccgatcctgatccgaagtatattaac
ccgctttttgtcaaccatcctgacaggtttaggcagtacggattgtgggagagatatgca
gagctataccctaaggaggatttagtctacaccgtcggcgttagtgattatagaaaagac
tggttcttcgctcaggtcaccaggaggaaaaacgacaacacatatcaagggaccacatgg
cagatcaagttcaaactcgacatggtagatcaaaccggaacctacaaactaagagtggca
ctagcagctgcaaatctcggcgaattgcaggtccgcgttaacgatccaaacccaacacga
cctctgttttcaagcggactaatcggaagggataacgtggtggctagacatggcatccac
ggactatattggctgttcaacgtggagattccaaatgctgctttggtgaaaggggagtac
aatacgatttatctgacgcagccaaggggacaatcatctttgcagaatctcatgtacgac
tacattcgcttggaaggtcccccgaccaaaggccaccaaatgagttacctttag
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