Rhododendron vialii: 131308005
Help
Entry
131308005 CDS
T09330
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
rvl
Rhododendron vialii
Pathway
rvl03018
RNA degradation
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131308005
09123 Folding, sorting and degradation
03018 RNA degradation
131308005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131308005
03041 Spliceosome [BR:
rvl03041
]
131308005
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131308005
mRNA degradation factors
5'-3' decay
Lsm complex
131308005
Spliceosome [BR:
rvl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
131308005
Complex C
U2 snRNP components
131308005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
DUF1256
Motif
Other DBs
NCBI-GeneID:
131308005
NCBI-ProteinID:
XP_058190777
LinkDB
All DBs
Position
1a:complement(47347997..47365223)
Genome browser
AA seq
93 aa
AA seq
DB search
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDIELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcttctcgtatttcaaggacctagtgggcagagaagtgactgttgaactgaag
aatgacctagcgattcgtggcactctgcattcggttgaccagtatctcaatattaagctc
gagaacactagggttgtggatcaagacaagtatcctcacatgctgtcggtgaggaactgt
tttatcagaggatccgtggtgaggtatgtccagttacctccggatggagttgacattgaa
ctgcttcatgatgccacgagaagagaagctcgcggcggctga
DBGET
integrated database retrieval system