KEGG   Rhododendron vialii: 131308011
Entry
131308011         CDS       T09330                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
rvl  Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rvl03016]
    131308011
Enzymes [BR:rvl01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     131308011
Transfer RNA biogenesis [BR:rvl03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    131308011
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH zf-CCCH_4 zf-CCCH_PARP12 zf-CCCH_2 zf_CCCH_4 DEAD_2 zf-CCCH_PAN3
Other DBs
NCBI-GeneID: 131308011
NCBI-ProteinID: XP_058190784
LinkDB
Position
11a:37929338..37936368
AA seq 701 aa
MDTDGAPVELDVEEPKVPEDAPPSGGGGGGIAEKTPEELIAKAIAPVKREFLRPPPIRPC
SNSNETNDAASGTKSAPSSSLLKEKKSKRQLKRERLQEKKSALHLCPEVARSGDASSCRY
NEKCRFSHDVEAFKAQKPDDLEGVCPFMSAEVPCPYGLACRFSGTHKDGFSADLNGRKEN
PEMNGLKKDVQHLLWKNKMRFPKADAQLKLLGLMGKINSKSKTSSDKEEGEKATSNGSSV
NDKNGSDVVACDSNIQTDDNPQLPKEEDYAAPTFASDELSRPMKKVKSCADEDYCPEELD
NGHIVLEKDLEKSCSQTESGTTTECISTETDGSLKSHPREKKLIDFREKLYLAPLTTVGN
LPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVTRT
VELIDQECTVDFIDINMGCPIDIVVNKGAGSALLMKPMRMKSIVQATSATVDRPITIKVR
TAYFEGKNRIDSLIEDIGQWGANAVTIHGRSRQQRYSKLADWEYIYQCARKAPNALQVLG
NGDVFSYLDWNKHKFDCPELSTCMVARGALVKPWIFTEIKEQRHWDISSGERLSILKDYA
RFGLEHWGSDAKGVETTRHFLLEWLSYTCRYIPVGLLDVIPQRMNWRPPSYFGRDDLETL
MASDSASDWIKISEMLLGKVPDGFTFAPKHKSNSYDRAENG
NT seq 2106 nt   +upstreamnt  +downstreamnt
atggacacggacggtgcaccggtggagctcgacgtcgaagaaccaaaagtaccggaagat
gcgccaccgtcgggtggcggcggaggcggaattgctgagaaaacaccggaggagctgata
gccaaagccatagcccccgtgaagagagagtttctccgtcctccgcctatcagaccttgc
agtaacagtaacgaaacgaacgacgcggcttctggtaccaagtctgctccatcttcaagc
cttctgaaggagaagaaatctaaacggcaactcaaaagagagcgccttcaggaaaagaaa
tctgcgctacatctatgtccagaggtagcaagaagtggggatgctagctcatgtcgttac
aatgagaagtgccgcttcagccatgatgtagaagcatttaaggctcagaaaccagatgat
ctagagggagtgtgtcctttcatgagtgctgaagttccatgtccttatggtttggcatgt
aggttttcaggtactcataaagatggcttctctgctgatttgaatggtcggaaggaaaac
cctgaaatgaatggtttgaaaaaagatgtgcagcatcttctttggaaaaacaaaatgagg
ttcccaaaggcagacgctcaactaaaacttcttggccttatgggaaagatcaattcaaaa
agcaaaacgtcctcagataaagaggaaggtgaaaaagctacttcaaatgggtcatccgtt
aatgataagaatggttctgatgtagtggcatgcgactcaaatattcaaactgatgacaat
ccgcaactacccaaggaagaggattacgctgctccgacatttgcatctgatgagcttagt
agaccaatgaagaaagtgaaatcttgtgcagatgaagattattgtcctgaggaattagac
aatggtcacattgtgctggagaaagatcttgagaaaagctgttctcaaacagaatcagga
actacgactgagtgtatttcgacagaaaccgatggaagcctaaagtcacacccccgagag
aagaagcttattgatttcagagaaaagctctatcttgcacccctgaccacagttgggaat
cttcctttccgtagggtttgcaaggttttaggagctgatgtgacatgcggtgagatggca
atgtgcacaaatcttttgcagggtcaagcttcagaatgggcgctgttgagacgtcattcc
tctgaggatttatttggggttcaaatatgtggggcatatcctgacacagtcacacgaact
gttgaacttatagaccaggaatgtacagtggacttcattgatatcaacatggggtgcccg
attgatattgttgtcaataagggtgctggatcagctctcctcatgaaaccaatgaggatg
aaaagcattgtacaagcaacttctgccacagttgacagacctatcactatcaaggtacga
acagcttattttgagggaaaaaaccgcatcgattcattaattgaagatattggacaatgg
ggagccaatgctgtaacaatacatgggcgatcgcgccagcaacgctatagtaagcttgct
gattgggaatacatctaccagtgtgcaagaaaggctcccaatgctttgcaagtcctggga
aacggtgatgtcttttcatatttagactggaataagcacaagtttgactgcccagagctt
tctacatgcatggttgctcgaggagcgttagttaagccttggatatttactgaaatcaaa
gaacagaggcactgggacataagttccggagaacggttaagtattttgaaggattatgct
cgctttgggctagaacattggggttctgatgctaaaggagtggagacaactaggcacttc
ttgttagaatggcttagctacacatgcaggtacattcctgttggtcttctggatgtcatc
ccacaacgaatgaactggcggccaccctcgtacttcggtcgtgacgatcttgaaacacta
atggcttctgattctgcgtctgactggattaagatatctgagatgttacttggcaaggtt
cctgatggctttacattcgcaccaaagcataaatcaaattcttatgacagagcagaaaat
gggtga

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