Rhododendron vialii: 131308111
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Entry
131308111 CDS
T09330
Name
(RefSeq) E3 ubiquitin ligase PARAQUAT TOLERANCE 3-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131308111
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131308111
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
U-box type E3
131308111
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_2
U-box
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
131308111
NCBI-ProteinID:
XP_058190910
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All DBs
Position
11a:complement(1814135..1823930)
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AA seq
882 aa
AA seq
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MAVYYKFKSAKDYDSIAIDGHFISVANLKEKIFESKHLGRGTDFDLVVTNAQTNEEYLDE
AMLIPKNTSVLIRRVPGRPRMTIVTEPVIEQDEPILDTNKSDDGQAAKSSFVGADSSLMH
YPEDSEWDEFGNDLYAIPEVLPMQASNPIQDASPPSKADEESLIKALIDTPALDWQRQTS
DGFGPGRGFGRGMGGRMMGGRGFGRGGLERKMPPQGYICHRCKVPGHFIQHCPTNGDPNY
DIKRVKPPTGIPRSMLMATPDGSYALPSGDVAVLKPNEAAFEKEIEGMPSTRSVGDLPPE
LHCPLCKDVMKDAVLTSKCCFKSFCDKCIRDYIISKSICVCGATNILADDLLPNKTLRDA
INRILDSNNSSAENAGSACQVQDMESKIPQLEMEPRVPSPSLSATSKGEQVPTAKSEEIF
KVKESTDEGKAVSAPFKSSEKGKMGKVPDASEATHDSISVKEPASQGSAPLADEDVQQRP
VSGEAGKKKKKKKARLPMNGLPANAADMQWKFPQDNLAADNYNMMPLGPSPYNPFWSGMQ
PGMEYAAPYGGSLPYMGYGLGPYDLPFGVLPQDPFGAQGFMMPPVPPHRDLADFGMGVNA
GPPVMSREEFEGRKADLQRKREIERRGESREFSKDREFSWEVSSSADFSSLKSKSKSASI
PAQASSGEHHRRRHRSERSSPELVARDSEIPRPSSKRKSDYNYDREYDNYHHRHSHNHRS
ESSAGRSSLEPPSPQPKSTTTTAPTLSKSASAAADRKQKPSVFSRISFPAEESSSKKRKL
PSSLSDALVASSSGHHSHSGRTTANGYHEDYTKTTSSSRTSAAAAEVDYESSEEDERHFK
RRPSRYKEEAEAEAEAEAEETPRHSRGLRDRNHGGYSTKHHR
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttattataagtttaaaagtgcaaaagattacgactcaattgctatcgacggt
catttcatatcagttgccaatttgaaagaaaaaatttttgaatccaagcatttgggcagg
ggtacagattttgacctcgttgtcaccaacgcccagactaacgaagagtatcttgatgag
gcaatgttgattcccaaaaatacatctgttttaattcgtcgagttccaggacgtcctcgc
atgaccatagttacagaaccagttattgaacaagacgagcctattttggacactaacaag
tcagatgatggtcaagcagcaaagagtagttttgtaggagctgattcatctctcatgcac
tatccagaagattcagaatgggatgaatttggaaatgatttgtatgcgattcccgaggtt
ttaccaatgcaagctagcaatccaattcaggatgcttcccctcccagtaaagccgacgag
gaaagtttgatcaaagctttaattgacaccccggccctggattggcagcgtcaaacttct
gatggctttggacctggtagaggttttggacggggtatgggtggaaggatgatgggcgga
cgtggttttggtcgaggtgggctggagcggaagatgcctccacagggctatatatgtcac
aggtgtaaggttcctgggcattttattcagcactgccccacaaatggagatccgaattat
gacatcaaaagagtgaaacctcctactggtattcctaggtctatgttaatggcaactcca
gatggctcatatgcattaccgagtggagatgttgctgtcttgaagccaaatgaggctgcg
ttcgaaaaagaaattgaaggaatgccttcaactcgttctgttggtgatcttccacctgaa
cttcactgtccgttatgcaaagacgttatgaaggatgcggtgctgacaagcaagtgctgc
ttcaagagcttttgtgataaatgtataagagactacataatatctaagtcaatttgtgtc
tgtggggctacaaacatactagcagatgatcttttgcctaacaagactctcagagatgca
attaataggattttggattccaataacagcagtgcagaaaatgctggcagtgcttgccaa
gtccaagatatggagtctaagattcctcagcttgagatggaacctagggttccgtcccct
tcactttctgcaacttcaaagggagagcaagtaccaacagctaaaagtgaagagattttt
aaagtaaaagagagtacagacgagggaaaggctgtcagtgctcctttcaagagctcggag
aaagggaagatgggaaaagttccagatgcttctgaggctacacacgattctattagtgtg
aaagaacctgcatctcaggggagtgctcctctggctgatgaagatgtacagcagaggcca
gtttctggtgaggcaggaaagaaaaagaaaaagaagaaagctcgtttgcctatgaatggt
ttgcctgcgaatgctgcggacatgcaatggaaatttccccaagacaaccttgcagctgac
aactataatatgatgcctttggggccttctccgtataatccattttggagtggcatgcaa
cctggcatggaatatgcagccccatatgggggttccctgccatatatgggttatggactt
ggaccttatgaccttccatttggcgtcttacctcaggacccatttggagcacaaggtttt
atgatgcctcctgtccccccgcacagggatcttgccgattttgggatgggcgtcaatgcc
ggaccccccgttatgagcagagaagaatttgaaggtcgaaaagctgatcttcaaaggaag
cgtgaaattgaaagacgaggtgaaagcagggaattctccaaagatcgggagttcagttgg
gaagtcagcagtagtgcagacttttcttcattgaaatccaaatctaagtcggcgtccatt
ccagcacaagcatcgagcggcgagcaccatcgccgccgccaccgatctgagaggtcgtcg
ccggaactcgtagcccgcgactccgaaattcctcgcccttcctccaagcggaagtcggac
tacaattacgaccgcgagtatgacaactaccaccaccgccatagccataaccaccgttcg
gagtcctcagctgggagatcatcactagaaccaccatcaccacagcccaagtccaccacc
acaacagcaccaacactgtccaagtccgcttctgctgcagcagatcggaagcagaagcct
agcgtcttctctcgcataagcttcccggccgaagaatcttcttctaagaagcgaaagctc
ccttcttcgttgtcggacgcactggtcgcttcttcttccggtcaccacagtcatagcggg
aggacgacagcaaatggataccatgaggattacacgaagacgacgtcgtcatcgaggacg
agcgctgctgctgctgaagtggattacgagtctagtgaggaggatgagcggcatttcaag
aggaggccctcgaggtataaggaggaggcggaggcggaggcggaggcggaggcagaggag
acgccgaggcattccaggggattgagggaccgcaatcatggtggttacagcaccaagcac
cacagatga
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