Rhododendron vialii: 131308218
Help
Entry
131308218 CDS
T09330
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
rvl
Rhododendron vialii
Pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131308218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131308218
Spliceosome [BR:
rvl03041
]
Complex A
Other components
Complex A specific factors
131308218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
zf-CCHC
RRM_5
KH_PNO1_2nd
PHD_4
Motif
Other DBs
NCBI-GeneID:
131308218
NCBI-ProteinID:
XP_058191052
LinkDB
All DBs
Position
11a:complement(5729629..5733513)
Genome browser
AA seq
765 aa
AA seq
DB search
MDSLAPNPPLPSSTSPYESPQPLYSQTLAPSPPPLPLDQSPPSDPTPPQPPPETIYPPNH
TPPQSQTLEASPNLSNSNLNGDDSTGRRRRRSRWDPPSDSGGEKKRKSRWAEDEQKPAVA
FQLPDFMKDFAGGMDMDPEIQPLNARLQEISRILQSGVQLDDRPEGGRSPSPEPIYDNFG
IRINTREFRARERLNRERQEIISQIIKRNPTFKPPADYRPPKLNKKLYIPMKEYPGYNFI
GLIIGPRGNTQKRMEKETGAKIVIRGKGSIKEGRIGQKRDLKFDPAENEDLHVLVEADTQ
EALDAAAGMVEKLLHPVDEGLNEHKRQQLRELAALNGTIRDDEFCRLCGEAGHRQFACPS
RMSTFKSDVLCKICGDGGHPTIDCPMKGGTVGKKMDDEYQSFLAELGGTGPEALTKQNPT
LSIMGSNGSVTNPPWASTIGGGTGNTSRPGLGCIVNTTDKEIDDANLYIGYLPSTLDDDA
LIRLFSPFGDIVMAKVIKDRNTGLSKGYGFVKYSDVAQANQAITSMNGYRLEGRVIAVRV
AGKPPQPVVPPGPPAPPMSSYPPPNQSVGGYPSQQNTSGGPLAGMPSGGYVGAPVPWGPH
APPPCAPYTHPFGGQNNYAPVQGPPMPPYGVPYPPPPQPAVSGAPSQSMLSSEPTSYPPG
VQSQNNGSADSAKSGPNNVYGNAMTGMLPNYQAWYHPFSLGYPSYYAAAPPPPPASHSTA
EQQNFASGPWASNPPAPPSVSPAEKNQPASHGADPEYEKFIAEMK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggattctttggcaccaaaccctcctcttccctcctcaacctcgccttatgaatctcca
caacctctctactcacaaaccctagctccctctcctcctcctcttccactcgatcaatca
ccgccgtccgatccaacccctcctcaacctccacctgaaaccatatatccaccaaatcac
acccctccccaatcccaaaccctagaagcctcacccaatctctcaaattctaatttaaac
ggggacgactcgacaggccggaggcggcggcggagccgctgggaccctccgtccgacagc
ggcggcgagaaaaagaggaagtcgaggtgggcggaagacgagcagaagccggcggtggcg
ttccagttgccggatttcatgaaggatttcgccggaggtatggatatggaccctgaaatt
caaccccttaatgctaggttacaagaaattagtcgaattttgcagtctggtgtccaacta
gatgaccggccagaaggcggtaggtcgccttctcccgaacctatttacgataatttcggg
attcggataaacactagagagtttcgtgcccgcgaaaggcttaacagggagagacaagag
ataatttcacagattataaaacgaaaccctactttcaagcctcctgcggattataggcca
cccaagctgaataagaagctttatatacccatgaaagagtacccagggtataattttatt
ggacttataattgggccgagagggaatacgcagaagaggatggagaaggagactggagcg
aaaatcgtgattcggggtaaagggtcgatcaaggaaggtaggattgggcaaaagcgggac
ttgaagtttgatccggcggagaatgaggacttgcatgttttggttgaggctgacacgcag
gaggcgcttgatgctgcggcgggtatggtagagaagcttctgcacccagtggacgaaggg
ttgaacgagcataagaggcagcagcttagggaacttgctgctttgaatgggacaataaga
gatgacgagttttgtaggttatgcggtgaggctggtcatcggcagtttgcctgcccctcc
cgtatgtctacttttaagagtgacgttttgtgcaagatttgcggtgatggtggtcatcca
actattgattgtcctatgaagggtggaactgtggggaagaaaatggacgatgagtaccag
agcttcttggcagaattaggtgggacaggcccggaagctcttaccaagcaaaacccaaca
ttgtctattatgggttccaatggatcagtaaccaatcccccttgggcaagcaccattggt
ggaggcactgggaatacatcacgtccgggattgggttgcattgtaaatacaacagataaa
gaaattgatgatgcaaatttgtacattggatacttgccatctacgcttgatgatgatgct
ctcattagattgttttcgcctttcggggacatagtaatggccaaggttattaaggatcgg
aatactggtttgagtaaaggttatggatttgtgaagtattcagatgttgctcaagccaat
caagccattactagcatgaatggttatcgtctagagggaagagtaatagcagttagggtt
gctggtaagccaccccaacctgttgtgccccctgggcctcctgctccaccaatgtcctct
tacccccctcccaatcagtccgttggtggatacccctcccagcagaatacatcaggtggg
ccccttgcgggtatgccatcaggaggctacgtaggtgcccctgttccttggggaccacat
gctccccctccttgtgctccttatacccatccctttggtgggcagaacaattacgcacct
gttcaaggtccacctatgcctccttatggggtgccgtatcccccaccgcctcaacctgca
gtttctggtgctccatctcaaagtatgctttcaagcgaacccacaagctacccccctggg
gtgcaatcacagaataatgggtcagcagattctgcaaaatctggacctaataatgtttat
ggaaatgcaatgactgggatgctaccaaactatcaagcttggtatcatccattttccttg
ggttatccttcttactatgctgcagctcctcctcctccacctgcgtctcattcaacagca
gaacaacagaactttgcaagtgggccatgggcttctaacccacctgctccaccatcagtt
tcacctgcagagaaaaatcagccagcaagtcatggtgcggatcctgagtatgagaagttc
attgctgagatgaaataa
DBGET
integrated database retrieval system
