Rhododendron vialii: 131308244
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Entry
131308244 CDS
T09330
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00900
Terpenoid backbone biosynthesis
rvl01100
Metabolic pathways
rvl01110
Biosynthesis of secondary metabolites
Module
rvl_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
131308244
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rvl01006
]
131308244
Enzymes [BR:
rvl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
131308244
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
131308244
2.5.1.29 geranylgeranyl diphosphate synthase
131308244
Prenyltransferases [BR:
rvl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
131308244
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
PSII_Pbs27
Motif
Other DBs
NCBI-GeneID:
131308244
NCBI-ProteinID:
XP_058191095
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All DBs
Position
11a:complement(38845821..38848295)
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AA seq
340 aa
AA seq
DB search
MVFSMANISSSPRPNFGKSSRPIFQPKIRCSVSSSSSLPLVSTQFDLRTYWTTLRAEINQ
KLDEAIPVKYPQQIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRLAAFPTACALEMVH
AASLIHDDLPYMDDDPSRRGQPSNHTIFGVDMAILAGDALFPLGFRHIVSNTPPDLVPEP
RLLRVIAEIARAVGSTGMAAGQFLDLEGGSNAVEFVQEKKYGEMGECSAVCGGFLGGAGD
DDIQRLRRYGRAVGVLYNVVDDVLEEKMKGEEREEEEEEKKKGGKSYVRKYGVEKAMEVA
EDLRAKAKRELDGFGKYGERVFPLYSFVDYAADRGFSVGD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggttttctcaatggctaatatatcatcgtctcccagacccaacttcgggaaaagcagc
agaccaattttccagcctaaaattcggtgttcagtttcttcttcttcttctttaccgctg
gtttcgacccaattcgatcttcgaacttactggacaactctgagagcagaaatcaatcag
aagctagacgaggccatacctgtcaagtacccacagcagatctacgaggccatgcgttac
tctgtgctcgccaaaggtgcgaaacgtgctcctccggtcatgtgcgtcgccgcctgcgag
ctcttcggcggcaaccgcctcgccgccttccccaccgcctgcgccctcgaaatggtacat
gccgcttcgttgatacatgacgatttaccgtacatggacgacgacccatcacggcgtggt
caaccctcaaaccacaccattttcggcgtagatatggctatcctcgccggtgacgctctg
ttccctcttggattccgccacattgtttccaacacccctccggacctggtcccggagccc
cggctcctccgagtcatcgccgaaatcgcccgggccgttggatctaccggcatggccgcg
ggccagttccttgacctcgagggtgggtccaatgctgtcgagttcgtccaggagaagaag
tacggggaaatgggtgagtgctccgctgtgtgcggcggtttcctgggtggcgctggggat
gatgatatccaacggctgagaagatacggacgagctgttggggttttgtataacgtggtt
gatgatgttttggaagagaaaatgaagggtgaggagagagaagaggaggaggaggagaag
aagaagggggggaagagctatgtgagaaagtatggagttgaaaaggcaatggaagtggct
gaggatctgagagcaaaagccaagagagaattggatgggtttggaaagtatggtgagagg
gtgttccctctctacagctttgttgattatgctgctgacagaggttttagtgttggtgat
taa
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