Rhododendron vialii: 131308312
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Entry
131308312 CDS
T09330
Name
(RefSeq) cyclic nucleotide-gated ion channel 17-like
KO
K27629
cyclic nucleotide gated channel 17
Organism
rvl
Rhododendron vialii
Pathway
rvl04075
Plant hormone signal transduction
rvl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131308312
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
131308312
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rvl04040
]
131308312
Ion channels [BR:
rvl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
131308312
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
131308312
NCBI-ProteinID:
XP_058191208
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Position
1a:complement(1190040..1197368)
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AA seq
720 aa
AA seq
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MELKKEKQVRFHSDGKEQKNFLWGRINPSNLDISSSGYKVSSSTLKTEDGFLGRNKFSET
FRFGKSKVFPEESQPWRKRILDPGSEIVLQWNRIFIFSCLVALFVDPLYFYLPSITGKGI
SKCVKSDLNLRIVVTCFRTVADFFYLLHVVIKFRTAFVAPSSRVFGRGELVMDPKKIAQR
YIRSDFFIDLIATLPLPQIVIWFIIPATRRPQADHNNNALALIVLIQYVPRLYLIFPLSS
QIIKATGLVTKTAWAGAAYNLLLYMLASHVLGAAWYLLSLDRYTSCWKSICRNETGSCVL
NFLDCDTDDDHRGTWPITTAVFNSCDPANNITFNYGIFENAVTKNVVSSSFLEKYFYCLW
WGLQNLSSYGQNLSTSTFIGETMFAILIAILGLVLFAHLIGNMQTYLQSITMRLEEWRLK
RRDTEEWMRHRQLPEDLRQRVRRFVQYKWLATRGVDEETILRGLPADLRRDIQCHLCLDL
VRRVPFFSQMDDQLLDAICERLVSSLSTEGTYIVREGDPVTEMLFIIRGKLESSTTNGGR
TGFFNSIVLRPGDFCGEELLAWALLPKSTTNLPSSTRTVRALVEVEAFALRAEDLKFVAN
QFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKRRRLTKSLTAVESFAESETRQEE
EQDGSPVSSSPSQAKMNLGVTILASRFAANTRRGAQKTKDLGMPTLRKPEEPDFSAEADD
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaagaaagagaagcaagtgaggtttcattctgatggaaaagaacaaaagaac
tttctttggggaagaattaacccctcaaacctggacatctcatcctctggatacaaggtt
tcatcctcaacattgaaaactgaagatgggtttttgggtagaaataaattcagtgaaacg
tttagatttggaaagtctaaggtgtttccggaggagtctcagccgtggcgcaagcgaatt
cttgatccgggtagtgagatagtgcttcaatggaaccggattttcatattctcctgtttg
gttgcactttttgtcgatccactttatttttacctgcctagtataacagggaaagggatt
tccaagtgtgtgaagagtgatttgaatctgagaattgttgtgacctgtttccgtactgta
gcagatttcttctatctgttgcatgtggttattaagtttaggacagcgtttgttgcacca
agctcccgggtgtttggtaggggtgaacttgtcatggatcccaagaagattgcccagaga
tacataagatctgactttttcattgatctgatcgcgactcttcctcttcctcagattgtc
atctggttcatcataccggctacaagacgtccacaagctgatcataataacaacgccttg
gcactgattgttttgatccaatatgttcccaggctatatctgattttcccattaagttct
caaataattaaagcaactggattggtcaccaaaactgcctgggcaggcgctgcatataat
ctgctattgtatatgctggctagccatgttttgggggcagcgtggtacttgttatcactt
gaccggtatacatcgtgctggaaatctatttgcagaaatgaaactggatcatgcgtactt
aactttttggattgtgatactgatgatgatcatcgcggaacgtggccaattactactgca
gtgtttaatagttgtgaccctgcaaataatatcacattcaattatggtatatttgaaaat
gcagtgacaaaaaatgttgtctcctcgagttttcttgagaaatacttttactgtctatgg
tggggcctacagaacttaagttcatacggacagaatttgtcaacaagcacattcatcggg
gagacaatgtttgccatcttgattgccatcttgggtcttgttttatttgcgcaccttatt
gggaacatgcagacatatctgcaatctataactatgaggcttgaggaatggagacttaag
cgaagagacactgaggagtggatgaggcatcgccaactccctgaagatttgaggcaacgt
gttcggcgctttgttcagtataagtggcttgcaactcgaggagtagacgaagaaactatt
ctacgcggcttacctgctgatcttcgtcgtgatatccaatgccacctctgcttggacctt
gttcgacgtgtcccattcttctcacaaatggatgatcaactactcgacgcaatatgtgag
cgtctagtctcctccttaagcaccgaaggcacctacatcgtacgagagggcgaccccgtg
accgaaatgctattcattatcaggggaaaacttgagagttctacaacaaacggaggcaga
actggattcttcaattctatcgtgctaagaccgggagatttttgtggggaggaactactc
gcttgggctttgcttcctaaatccaccacaaacttaccttcttcaactaggactgttcgc
gcgcttgttgaagtggaagcatttgctttgagagctgaggatttgaaattcgtagcgaat
caatttagacgcctccatagtaaaaagctgcaacatactttccgattctattcccaccac
tggaggacgtgggctgcctgctttatacaggcggcttggcggcggtacaagaggaggagg
ttgactaaaagtctgacagctgtcgagtcattcgcagaaagtgaaaccagacaagaagag
gaacaggatggtagcccggtaagttctagcccttctcaggcaaaaatgaacctgggggta
actatattggcttcaagattcgctgcaaacactaggagaggtgctcagaagactaaagat
ctgggcatgcccacattgcggaaaccagaagagcccgacttctctgctgaggcagatgat
tag
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