Rhododendron vialii: 131308681
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Entry
131308681 CDS
T09330
Name
(RefSeq) E3 ubiquitin-protein ligase HEL2-like isoform X1
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131308681
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131308681
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131308681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Actin_micro
Motif
Other DBs
NCBI-GeneID:
131308681
NCBI-ProteinID:
XP_058191637
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All DBs
Position
11a:27075605..27082306
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AA seq
774 aa
AA seq
DB search
MDDTCAVCAETLEWAAYGQCGHREVCSTCIARLRFICDDRRCCICKSESSIVFVTKALGD
YTRMINDFSILPVDPMEGQVGPFWYHEGTQAFFEDFDHYKMIAATCKLSCVVCDKKDEQG
SEGSVRRMKFRNIEQLKSHLFHHHRLFTCILCLEGRKMFICEQKLYSRTQLKRHISIGDS
EVDGSESERGGFKGHPTCEFCQNPFYGDNELYTHMSTEHYTCHICQRQRPEQYDYYRNYD
DLEIHFRREHFLCEDEACLAKKFIVFPNEPEMKRHNAMEHGGHMSRSKRNAALQIPISFQ
YRRSREQDQTRRRHGLHPDYSESELSLAIQASLETTNAYVPRATSSRDSDHRETSEIDPI
GGSFGIASVDSGSSSSNAPLEESSFPPLPVAARSSLQKTKKDSKGMGRTSMASHLRRQNN
VTVLNTSQVRPTATRHLSSHIGSSSQLRPMSNSGHVSSSGSSSSSTMTKSTSKDTHSAST
SILVDGGSLDRAISTSPPVSITDSNILTGNNKNLAKVEDIKNANKSLVERIRADLECDKD
RYAAFKLISSEYRQGIVDTGEYLAYVHQFGLSHHVLELARLCPDAQKQKELLEACSGSSR
SNGPLENNPLNSSSQVRHKKSSKKGKEKCKDVGIGGSNGTLVDSIVNSARELQFNHKPSK
NDEPTNLVSGNQTLFGMTVQTHSQSTVDGSKNTLGTKAGGNKPRKKTSKFHRVRVGESSS
AAVLDLTNSDGRPDPTDKGQSDDNTRGGLEALPVRGAWKNGGGKRLVGKLGMTR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggatgatacttgtgctgtctgtgctgagacgctcgagtgggccgcatatgggcaatgt
ggacatcgtgaagtctgctccacctgcattgctcgtctccggttcatttgtgatgatcgc
cgctgttgcatttgcaagtctgagtccagtattgtttttgtcaccaaggctttaggagat
tatacgagaatgataaatgacttctccattcttccagttgatccaatggagggtcaagtt
gggcccttttggtatcatgaaggcacacaagctttctttgaggattttgatcactataag
atgatcgctgcaacgtgcaagctttcatgcgttgtttgcgacaagaaagacgagcaaggc
agtgaaggctcagtaaggaggatgaaatttaggaacattgagcagctgaagagccacttg
ttccaccatcataggctgttcacgtgcattctttgcttggaaggcaggaagatgtttata
tgtgaacagaagttgtatagtagaacacaactgaaacggcatataagcattggtgactct
gaggttgatggtagtgaaagtgaaagaggtggttttaagggacatcctacgtgtgagttt
tgccaaaatcccttttatggggataatgagctgtatactcatatgtctaccgagcattat
acttgtcacatatgccaaaggcagcggccggaacaatatgattactacagaaactatgat
gatttggagatacattttcgtcgagaacacttcttatgtgaggatgaggcctgccttgct
aaaaagttcattgtatttccaaatgaacctgagatgaagaggcataatgcgatggaacac
ggagggcacatgtctcggtctaagcgtaatgctgctcttcagataccaataagctttcag
taccggagaagcagggagcaggatcaaaccagaagaagacatggccttcatcccgactat
tctgaaagtgaactttctttggccattcaagccagtcttgagaccaccaatgcctatgta
cctcgtgctacttcatccagggattccgaccacagagaaaccagtgaaatcgatccaatt
ggtgggtcatttggtatagctagtgtagattctggttcctcttcaagcaatgcaccattg
gaagaatcctcatttcctccgctccctgtggctgcaagaagcagtctccagaaaaccaag
aaggactcaaaagggatgggccgcacttcaatggctagtcaccttcgtcgccagaacaat
gtaactgtccttaatacatctcaggttcggccaacagctactcgccacctgtcctcacac
ataggaagctcttcccagctaagacctatgtcaaactctggacatgtttcatcatctggg
tcatccagttcatcgacaatgacgaaaagtaccagtaaggacactcattctgcttctact
tcaatacttgtggatggaggttccctagaccgtgctatatctaccagtcctcctgtttcc
ataacagattctaacatattgacaggaaacaataagaatttagctaaggtcgaagacatt
aagaatgctaacaaatctctggtggagagaatccgtgccgatttagaatgcgacaaagac
agatacgccgctttcaaactgatatcttcagaataccgccagggtatagttgacactggg
gaatatcttgcatatgtgcatcaatttgggctatcgcatcatgtccttgagctggctaga
ctatgtcctgacgctcagaagcaaaaagagcttcttgaagcttgcagtggcagttcgaga
agcaatggtcctctggaaaacaaccccttaaatagcagcagccaagtgagacacaaaaag
agttcaaaaaaagggaaagagaagtgcaaagatgttgggatcggtggttcaaatggtact
ttggtggatagcattgtaaacagtgcgagggaattgcagttcaatcacaagccttccaaa
aatgatgaaccaaccaatttagtttctggcaatcagaccttattcggaatgacggtccaa
acacactctcagtcaactgttgatggctctaagaacactctagggacgaaggcaggaggg
aataagccgcgcaagaaaacttcaaaattccatagggttcgggtgggtgagagttcatct
gcagcagttctggatcttacaaattctgatggtcgtcctgatccgacagataaaggacaa
tcagatgacaatactcgtggtggtttggaggctttgccagttcgaggagcttggaagaat
gggggaggcaagagactagttggcaaattggggatgaccaggtga
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