KEGG   Rhododendron vialii: 131308870
Entry
131308870         CDS       T09330                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
rvl  Rhododendron vialii
Pathway
rvl03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    131308870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rvl03019]
    131308870
   03036 Chromosome and associated proteins [BR:rvl03036]
    131308870
Messenger RNA biogenesis [BR:rvl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     131308870
Chromosome and associated proteins [BR:rvl03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    131308870
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_DCAF12 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_BBS7
Other DBs
NCBI-GeneID: 131308870
NCBI-ProteinID: XP_058191893
LinkDB
Position
11a:complement(31202958..31211864)
AA seq 346 aa
MATFGAASNANNPNKSAEVAQPPSDSVSSLAFSPKGNFLVATSWDNQVRCWEIMRNGTTI
GSVPKASMSHDQPVLCSTWKDDGTTVFSGGCDKQVKMWPLGAQPVTVAMHDAPVKDIAWI
PEMNLLVSGSWDKTLRYWDLRQSTPVHTQQLPERCYSISVRHPLMVVGTADRNLIVFNLQ
NPQTEFKRITSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESQQAKNFTFKCHREG
NEIYSVNSLDFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSAFNSDGSIY
AYAVCYDWSKGAENHNPATAKTNIFLHLPQESEVKGKPRTGTSGRK
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggccactttcggtgccgcttcgaatgctaataatcccaacaagtcggctgaggtagca
caacctccaagtgattctgtatcaagtcttgctttcagtcccaagggtaatttccttgtg
gcaacttcgtgggataaccaggtgagatgttgggagataatgcggaatgggaccaccatt
ggcagtgtgcccaaggcatcaatgtcacatgaccagccggttttatgctcaacttggaag
gatgacggtacaactgttttctctgggggatgcgacaagcaagttaaaatgtggccgtta
ggtgcccaaccagttactgtggccatgcacgatgcacctgttaaggatattgcatggatc
ccagagatgaacctcttagtgagtggaagttgggacaaaaccctgaggtattgggatctg
agacagtcaactccagtgcatacgcaacaacttcctgagcgctgctattcaatttcagtg
agacatccactgatggtcgtcggaactgcggataggaatcttatcgttttcaacttacaa
aaccctcagactgaatttaaaaggatcacctcacccttgaagtatcaaacaaggtgtgtt
gctgcctttcctgatcagcaaggtttcttggttggttcaattgagggcagggttggtgta
catcatcttgatgaatcgcagcaagctaaaaattttactttcaaatgtcatagagagggc
aatgagatatactcagtcaactcgctggacttccatcctgtccatcacacgttcgcaact
gcaggatctgatggtgcttttaacttttgggacaaggatagcaaacagaggcttaaggca
atgtcaagatgcagtcaacctataccttgcagtgctttcaacagtgatggctcgatctat
gcctacgcggtgtgttacgattggagtaagggtgcagaaaatcataacccagccaccgca
aagaccaacattttcctgcacttgccacaggagtctgaggtgaaaggcaaaccacgaacg
ggaaccagtggcagaaagtga

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