KEGG   Rhododendron vialii: 131309326
Entry
131309326         CDS       T09330                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
rvl  Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rvl03041]
    131309326
Spliceosome [BR:rvl03041]
 Complex B
  Other components
   Complex B specific factors
    131309326
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 LisH_TPL WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_NWD2_C Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_SCAP Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_Vps41 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N DUF7165 Beta-prop_SPT8 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_WDR75_2nd VPS8_N Mala_s_1-like Beta-prop_LRRK2 PROPPIN zf_topless Beta-prop_IP5PC_F Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 131309326
NCBI-ProteinID: XP_058191962
LinkDB
Position
12a:complement(467081..482631)
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSLETFVADINSGRWDTI
LPQVAQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRMEH
LLVRTYFDPHEAYQDSTKEKRRAQIAQALAAEVSVVPPSRLMALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDMYATNLGHTIKFGKKSHPECAQFSPDGQFLVSCSVDGFVEV
WDHISGKLKKDLQYQADETFMMHDDAALCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLR
RLEHAHSQGVTSLTFSRDGSQLLSTSFDGTARIHGLKSGKLLKEFRGHGSYVNDAIFTSD
GARVITASSDFTVKVWDVKTTECLHTLKPPPTLRGADASVNSVHLFPKNTDHIIVCNKTS
SIHLMTLQGQVVKSFSSGKKEGGDFVAACVSPKGEWIYCVGEDRNMYCFSHQSGKLEHLM
KVHDKDVIGITHHPHRNLVATYSEDCTMKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctacgctcgaaatcgaagcccgagatgtgattaagatagttcttcaattctgcaaa
gaaaattctttgcatcaaactttccaaacattacagagtgagtgtcaggtttctctcaat
acggtagacagccttgaaacatttgttgcggatattaacagtggaaggtgggatacaata
ttacctcaagttgcacaacttaagcttcctaggaagaaactagaagatctctatgaacag
attgttttggaaatgatcgaacttcgggaattggatactgcacgtgctatattaaggcaa
acccaggtaatgggcgtcatgaaacaagagcaacctgaaagatatttgcgaatggagcat
ctccttgttagaacttatttcgatccgcatgaggcttatcaagattcaacaaaagagaaa
agacgtgcacaaatagctcaagctctcgctgcagaggtttctgtggttccgccgtcacga
ctaatggctctaattggtcaggctttgaagtggcagcagcaccaagggttgcttccgcca
ggcacacagtttgacctattccgagggacggctgctatgaaacaagatgtagatgatatg
tacgcgacaaatcttgggcatactattaagtttggaaagaaaagtcacccagaatgtgcg
cagttctcaccagatggacagttccttgtttcttgctctgttgacggatttgttgaggtt
tgggaccacataagcgggaagttgaagaaggatcttcaataccaagctgatgagacattt
atgatgcatgatgatgctgccctttgtgttgattttagtagagattctgagatgctggca
tctgggtcccaagatggaaaaatcaaagtttggcgcataaggactggacaatgcttgcgc
cgccttgaacatgcacattctcagggtgtcaccagtcttaccttctctcgagatggaagt
cagctattaagcacatcatttgatggcacagcaagaatccatggcctaaaatcagggaaa
ttattaaaggaattccgtggacatggatcctatgtgaatgatgccatctttacgagcgat
ggagctcgtgtaattactgcatctagcgattttactgtcaaggtttgggacgtcaagact
acagaatgtctgcacacattaaagccaccacctactttaaggggagctgatgcgtcagtg
aattctgtccatctttttcctaaaaatacagatcacataattgtgtgtaacaagacttcg
tcaatacacctaatgacacttcaaggacaggttgtaaagagcttctcatctggtaaaaaa
gaagggggagactttgtagctgcttgtgtatcacctaaaggggagtggatttactgtgtt
ggtgaagatagaaatatgtactgcttcagccaccaatctggtaaactggagcatcttatg
aaggtccatgacaaagatgtaattggtatcactcaccatccccacagaaacctcgttgct
acctatagcgaggactgcacgatgaaattgtggaagccttag

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