Rhododendron vialii: 131309744
Help
Entry
131309744 CDS
T09330
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131309744
03036 Chromosome and associated proteins [BR:
rvl03036
]
131309744
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131309744
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131309744
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
131309744
microRNA pathway
RISC loading complex
131309744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
Gly-rich_Ago1
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
131309744
NCBI-ProteinID:
XP_058192327
LinkDB
All DBs
Position
12a:complement(25376948..25386880)
Genome browser
AA seq
1074 aa
AA seq
DB search
MPRKKKTEAPGGGESSEHQDVSGGGSGGPQRPPAQQTPQQQGGYQQGGGRGWAPQSQQGG
RGGYGGRGGSGPQRGGMVPQQHYGGPPEYHQQGRGAQPRGGAPQQQRRGGGVSGGRGVGG
PPPSGPFSRPPVPELHQATQAPPYQAKPAEMHGESSSHTAVPEPSTLQVTQEFQQLSVQE
EGGSSQAIQPAPLSSKSMRFPLRPGKGNTGARCIVRANHFFAELPDKDLHQYDVSITPEV
TSRGVNRAVMEQLVKLYKESHLGKRLPAYDGRKSLYTAGPLPFVTKEFKITLVDEDDGSG
SARREREFKVVIKLAARADLHHLGLFLQGRQADAPQEALQVLDIVLRELPTNRYCPVGRS
FYSPVLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVTRLLNR
EVSPRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISALTSQATRELTFPVDERGTMK
SVVEYFQETYGFSIQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITALLK
VTCQRPQEREFDILQTVRHNAYAEDPYAKEFGIKISEKLASVEARVLPAPWLKYHDTGRE
KDCLPQVGQWNMMNKKMVNGGTVNNWICINFARNVQESVARGFCYELAQMCVISGMVYNR
EPVLPPYSARPDQVERVLKGRFHEAMTKLQPQGKELDLLIVILPDNNGSLYGDLKRICET
DLGIVSQCCLTKHVFRMNKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSDIPTIIFG
ADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQEHRQELIQDLYKSWQDPVRGAV
TGGMIKELLISFRRATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACNSLEPNYQPP
VTFVVVQKRHHTRLFANNHNDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGT
SRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP
ETSDSGSMTSAAAAGRGMIAGAGARSSRVPGANAPPVRPLPSLKDNVKRVMFYC
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaagaagaaaactgaagctcctggtgggggagaaagctctgagcatcaggat
gtgagcggaggaggcagtgggggtcctcaacgtccgccagctcaacaaacaccgcagcag
caaggaggttatcagcaaggtggcggtagagggtgggctccccaatcccagcaaggagga
cggggaggttatggtggacgcggtggtagtggtcctcagcgcggtggaatggtgcctcag
cagcattatgggggcccccccgagtatcaccaacagggcaggggagctcagcctcgagga
ggggcacctcaacagcagcggcgcggtggtggtgtgagtggtggccgtggggttggagga
cctcctcccagtgggcctttttcaaggccaccagttcccgagctgcaccaagctacccag
gctcctccctatcaagcgaaacctgcagaaatgcatggtgaatccagttctcatactgcg
gtgcctgagcctagcactttgcaggtcactcaggagtttcagcagctttccgtacaggaa
gaaggggggtcgagccaagcaattcagcctgctcctctctcaagtaaatcaatgagattc
cctcttcgtccaggcaagggaaacactggtgctaggtgtattgtcagggccaaccacttc
tttgctgaattgcccgacaaagatttgcaccaatacgatgtctcgattacgcccgaggtg
acatcaaggggtgttaaccgtgcagtgatggaacagctggtgaaactgtacaaggaatct
catcttggtaagcggctccctgcttatgatggaagaaagagcttgtatactgcaggcccc
ctcccttttgtcacaaaagagttcaaaatcactctcgttgatgaagatgatggatccggc
agtgcgaggagagagagggaatttaaagttgtgatcaaactggctgcacgtgctgacttg
caccatttaggattgtttttacaagggaggcaggctgatgcaccccaagaagctctccag
gttctggacatcgttttgcgcgaattgcccactaatcgatattgtcctgtgggccgctca
ttttactcgcctgttttggggagaaggcagccattgggtgaaggactagaaagctggcgt
ggtttctaccagagtattcgcccaacccagatgggtctgtcgctgaatattgatatgtcc
tccactgcttttattgagcctctgcccgtcattgagtttgtgactcggcttctgaatagg
gaggtatctccaagacctttgtctgatgctgatcgtgttaagataaaaaaagcattgagg
ggagtgaaggtggaagttacccaccggggaaatatgcgtaggaaataccggatatctgca
ttaacctcacaagcaacaagagagttaacattcccagttgatgaaagaggtactatgaaa
tctgtggtagagtactttcaggagacatatgggttctccatccaacatactcaatggcct
tgtctacaagtcgggaatcagcagaggccaaattacttacccatggaggtttgcaagatt
gttgagggtcagaggtattcgaagaggttgaatgagagacaaattactgctttgcttaag
gtgacctgtcagcgcccacaggaaagggagtttgacattctgcagacagtccgccacaat
gcctatgctgaagatccttatgcaaaggagttcggaatcaaaattagtgagaaactggct
tcagtagaagcacgtgtcctccctgctccctggcttaagtaccatgatacgggtagggaa
aaagattgcctccctcaagttggtcaatggaacatgatgaataagaaaatggtgaacggc
ggaactgtgaataactggatctgcataaattttgcacgcaatgtgcaagaaagtgtggct
cgtggcttttgttatgagcttgcgcaaatgtgtgtaatatctggaatggtatataatcgg
gaacctgtgctcccaccatacagtgcacggccggatcaggtagaaagagtcctgaaaggt
cgattccatgaagccatgacgaaacttcagcctcagggcaaggagcttgacctgctaatt
gttattctgccggataacaatggatccctctatggggatttgaaaaggatctgtgagaca
gatcttggaattgtttcgcagtgttgtttgactaaacatgtgttcaggatgaacaaacaa
tatcttgcaaatgttgccttaaagattaatgttaaagtggggggaaggaatactgtgctt
gtagacgcaatatctagacgcatacctctagttagtgacatacccactattatttttggc
gctgatgttacacatcctcatcctggcgaagattcaagcccttccattgctgctgtggtt
gcttcgcaagattggccagaggttacaaaatatgctggtttggtttgtgctcaagagcat
cgtcaggagctcattcaggatttgtataaatcttggcaagatcctgttagaggagctgtg
acgggtggaatgataaaggaacttctcatttctttccgtagagcaacagggcagaaacca
ctgcggataatattttaccgggatggtgtcagtgaaggacagttctatcaggttttgctt
tacgaacttgatgctattagaaaggcttgtaactctttagagccaaactatcagccccca
gtcacttttgttgtggttcagaaacgacatcacacaaggttgtttgccaataaccataat
gatcgaaatgcagtagacaggagtggaaatatactgccgggtactgttgtagattccaaa
atctgccatcccacagaatttgatttctacctgtgcagccatgctggcatacaaggtacc
agtcgaccggctcactaccatgtgttgtgggatgagaacaacttcacagccgatgggctc
caatcacttaccaataacctttgctacacttacgcaagatgcacccgatctgtgtctatt
gtgccgcctgcatactatgctcacttggcagctttccgggctcgcttctatatggagcct
gagacatcggatagcggttcgatgacgagtgctgctgctgctggtcgtggtatgatagct
ggtgcaggtgcacgcagctcgagggtgccaggtgctaatgctcctcctgtcagacccctc
ccttcccttaaagacaatgtcaaaagggtcatgttctactgctag
DBGET
integrated database retrieval system
