Rhododendron vialii: 131309998
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Entry
131309998 CDS
T09330
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00040
Pentose and glucuronate interconversions
rvl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131309998
Enzymes [BR:
rvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131309998
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131309998
NCBI-ProteinID:
XP_058192742
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Position
12a:19909168..19911773
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AA seq
402 aa
AA seq
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MAIPLFLVLLLPLLSPNPISCSPVQDPEKVVQEVNERINASRRKLGFLSCGTGNPIDDCW
RCDPNWEQNRQRLADCSIGFGKNAIGGKDGKIYIVTDPQDNDPVNPKPGTLRYGVIQDEP
LWIIFARDMVIKLKEELIMNSFKTIDGRGSSVHIAGGPCLTIQFVTNIIIHGINIHDCKQ
GGNANVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN
NYMTHHNKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSAEPTINSQGNRFLAPNDRFNKEITKREEAPESEWKKWNWRSEGDLMLNGAFFT
ATGAGASSSYAKASSLGARPSSLISSITSGAGALGCKKGSRC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccctctgtttcttgtactcctcttgccccttctatctccaaaccccatctct
tgttcaccagttcaagaccccgagaaagtagtacaagaagtgaatgagcgcatcaatgca
tcgagaaggaaattgggttttctctcttgtgggacgggcaaccccatcgacgattgttgg
cggtgcgatccaaattgggaacaaaatcgccaacgcctagcagattgctctattgggttt
ggcaaaaatgccattggtggcaaggacggtaaaatctacattgttaccgacccgcaagac
aatgacccggtaaacccaaaacccggcacactacgatacggcgtgatccaagacgagcct
ctgtggatcatattcgcacgtgacatggtgatcaagctcaaagaagagctgatcatgaat
tcattcaagacgatcgacggtcgaggatccagcgtccacatcgccggcgggccctgcctc
acaatccagttcgtaaccaacattatcatacacgggatcaacattcacgattgcaagcag
ggggggaatgccaacgtgcgggactccccgcggcactacgggtggaggacgatatcggac
ggcgatggcgtgtcgattttcgggggaagccatgtttgggtggaccattgctcgctgtcg
aactgcaacgatggtctcattgatgcaattcatggatcaacggctataactatatctaac
aactacatgacccaccataacaaggttatgctgttgggccacagtgatagctttacacag
gacaagaacatgcaagtcaccattgcattcaaccactttggggaggggcttgtgcaaagg
atgccaagatgtagacatggatactttcatgtggtgaacaatgactacacccattgggaa
atgtatgcaattgggggaagtgcagagcccaccatcaacagccaaggcaacagattcctg
gctcccaacgacaggttcaacaaagagattacaaaacgtgaggaagcgccggagagtgaa
tggaagaaatggaattggagatccgaaggcgatttaatgttgaatggtgcatttttcacg
gcgaccggagccggggcatcatctagttatgcaaaggcatcgagcttgggagcgagaccc
tcttcgctaattagctcaattacttcgggagcaggtgcacttggctgcaagaaaggctca
cgctgctaa
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