Rhododendron vialii: 131310069
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Entry
131310069 CDS
T09330
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131310069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131310069
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131310069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
131310069
NCBI-ProteinID:
XP_058192851
LinkDB
All DBs
Position
12a:18664598..18669305
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AA seq
386 aa
AA seq
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MFGAQSSSPSLFGTPSLTPNPFGTPSTPFATPSSTPAFGTPSTPSFSTSAFGTSSLFSTP
SFNPQQQQQQQQQQSSGAFNFSTPFGQTTTTPPPQQQQSQLTPFGQSTNPFGNAQLTTQM
APVAPLPFSLADRDIQAIVDAYKEDPGNPKYAFKHLLFSVTEPQFRIKPTGVSDIMWAEA
MGKLEGMESSNRERLWPHLVQGFKDLSQRLKLQDEVILSDAERLRMTQSNVKMLQRHFQA
DTLPWIERLRQKEQGLQRRLLRVMRIVEALEGKGCRMPLMKGEVELAEKLATITRQLKGS
GAELSRRVQNLLTVARVQANGGGGGGGGSIYLPGSTKIHDQSLADMQEVLQQQTEAIARL
GNVLKRDLRDTEIIMAEDTEMKEDAS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcagtcctcgtctccgtccctcttcgggaccccatcactgacccccaac
cccttcggtactccctccacccccttcgccactccttcctccacccccgccttcggcacc
ccctccaccccctccttctccacttccgccttcggtacgtcttctctcttctctacacct
tcattcaatccccaacaacaacaacaacaacaacagcaacagagctccggcgcattcaac
ttctccactcccttcggccaaactactactacaccaccaccacaacaacagcagtcacag
ctcactccgttcggtcagtcaacgaatcctttcgggaatgctcagttgactactcagatg
gcccccgtggctcctcttcctttctctctcgcggatcgcgacatccaagcgattgttgat
gcttacaaggaggatcctgggaaccctaagtatgcatttaagcatttgttgttcagcgtt
actgagccgcaatttaggataaagccgactggtgtatcggatatcatgtgggcggaagct
atggggaagctagagggtatggagagttctaaccgtgaacgcctttggcctcacttggtt
cagggtttcaaagacctctcgcagcgcctcaagcttcaggatgaagttatactctctgat
gccgagagattgcgaatgactcaaagcaatgtgaagatgcttcaaaggcattttcaagct
gacactcttccttggattgaaagattgagacaaaaagagcaaggtcttcaaaggcgccta
ttaagagtgatgagaatagtagaggcattggaaggtaagggatgcagaatgcctttaatg
aaaggagaagttgaattggctgagaagttggctacgataactagacagttgaaaggatct
ggagcagaactttccaggagggtccaaaatctgctcactgtagctcgtgttcaggcaaat
ggtggcggcggcggtggtggtggttctatttatcttccaggatcaaccaaaatacacgat
cagagtcttgctgatatgcaggaggtcttgcaacagcagactgaagccattgctaggcta
ggcaatgtgttgaagcgggatctcagagatacggagattataatggccgaggatacggaa
atgaaagaagatgctagctaa
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