Rhododendron vialii: 131310139
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Entry
131310139 CDS
T09330
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rvl01009
]
131310139
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131310139
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rvl04040
]
131310139
Protein phosphatases and associated proteins [BR:
rvl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131310139
Membrane trafficking [BR:
rvl04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
131310139
Ion channels [BR:
rvl04040
]
Chloride channels
Chloride channel (CLC)
131310139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
131310139
NCBI-ProteinID:
XP_058192965
LinkDB
All DBs
Position
2a:2470320..2482265
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AA seq
796 aa
AA seq
DB search
MLSNQFQNGIETTKLAWARLPNTEDGEGDEVVGVSRKNDGARVESLDYEVVENHAYREEQ
AQRGKLYVGYYVGVKWFFALLIGVGTGLAAVFINISVENFAGWKFSLTFSVIQKSYVAGF
LLYILINLVLVFSSAFIITNFAPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKIFGSIG
SVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLSSRWLQFFNSDRDRRDLVTCGCAAG
VAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRIAMGWCKSGKCGHFGSG
GFIIWDISGGQEDYSFEELLPMAFIGVIGGLLGALFNQLTRYITYWRRNYLHKKGNRFKI
IEVCLISVITSVISFGLPLFRKCSPCPEADPNFPIACPRPPGMYGNYVNFYCGKDKEYND
LATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYTLAVVTFGTAVPAGQFVPGIMI
GSTYGRLVGMFVVSFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLP
LIMLVLLISKAVGDAFNEGLYEEQARLRGIPLLESRPKYEMRKMQAKEACGNRKVVYFPR
VIKVADVVSSLKSNNHNGFPVIDHTRSGETLVIGLVLRSHLLVLLQSKVDFQHSPLPCDT
GGGSLPIRHNFSEFVKPASSKGISIHDIHLGPDDLEMYIDLAPFVNRSPYIVPEDMSLTK
VYNLFRQLGLRHIFVVPRASRVIGMITRKDLLIEETEDPATVELQSTSVRDRLHNIRHGT
RNGEAEIPLLNGLLAQ
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgaatcaatttcagaacggaatcgagacgacaaagctcgcgtgggcccggctg
ccgaacacggaggacggcgagggggacgaggtcgtcggggtgtcgaggaagaacgatgga
gcccgagtcgagagcctggattacgaagtcgttgagaatcacgcgtaccgggaagaacag
gcacaaagaggaaagctttatgttggatattatgttggcgtgaaatggttctttgcgttg
cttattggcgtaggaactgggttagctgctgtcttcatcaacatttctgttgaaaacttt
gctggatggaagttctcactgactttttctgtaattcaaaaatcatacgtcgctggattt
cttctgtatatattgatcaacttggttttagtcttctcttcggcatttataatcaccaat
tttgcaccagcagcagcaggatctggtattcctgagattaagggttatttgaatggagtt
gatacccacggtattcttcttttcagaaccttgattggaaagatatttggaagtattggt
tcggtaggaggtggcctggcccttggcaaagaaggtcctcttgtacacactggtgcttgt
attgcttcactccttggacaaggtggatcaacaaaatatcatctaagttccaggtggcta
caatttttcaacagtgaccgggatcgacgtgatcttgtaacctgtggatgtgcagctgga
gttgctgctgctttcagagctccagttggtggagtgttatttgcattggaagaagttaca
tcatggtggaggagccaacttatgtggcgtgtatttttcacttctgccatagtggctgtt
gtggtgcgtattgctatgggatggtgtaagagtggaaaatgtggacattttggatctggt
ggtttcataatatgggacatctcaggtgggcaggaggattactcattcgaggagttatta
ccaatggcatttattggggtcataggcggtcttcttggagccttattcaatcagcttaca
cgttatattacctattggcgccgaaattacctacacaagaaaggaaaccggttcaaaatt
attgaagtgtgtctcatctccgtgattacatctgtcatttcatttggattaccccttttt
agaaaatgtagtccctgccctgaagcagaccctaattttcctattgcatgccctcggcct
cctggaatgtatgggaattatgttaatttttactgtggcaaggacaaggaatacaatgat
cttgcaactatcttctttaacactcaggatgatgccatacgaaatttgtttagtgcgaaa
acaattcatgaatacagcgcccaaagcctgttgacctttctggtaatgttttatacctta
gcagtggtgacatttggaactgctgttccggctggtcaatttgttcctggaattatgatt
ggatcaacatatggacgtcttgtaggcatgtttgttgtcagcttttacaagaagcttaac
attgaagagggaacatatgctttgctaggagctgcttcattccttggaggttcgatgagg
atgacggtctcactttgcgttattatggttgaaattacaaataacttgaagctgctacct
ctaatcatgctcgtgcttcttatatcaaaggctgttggtgatgctttcaatgaaggtctg
tacgaagaacaggctcgtttgaggggcattccgttacttgaatcaaggcctaaatatgaa
atgcggaaaatgcaggcaaaggaagcatgtgggaatcgaaaggttgtctacttccctcgt
gttattaaggttgctgatgtagtttctagtttgaaaagcaacaatcataatggattccct
gtgatagatcacacaagaagtggagaaacacttgttatcggactagtgcttcggagtcat
ttattggtacttctacaatctaaggtagattttcagcacagtccgttgccctgtgatacc
ggaggtggttctttgccgatcaggcacaatttcagtgaatttgtcaaacctgcttcgagc
aaagggatatctatacatgatattcatctaggtccagatgacttggaaatgtacatagat
cttgcaccatttgtaaaccgctccccatacattgtcccagaagacatgtctttgacaaag
gtttataatcttttccgtcaactaggattaaggcatatatttgtcgttccacgtgcttcc
cgcgttatcgggatgattaccagaaaggatttgttaattgaggagactgaggatccggct
acagtggagcttcaatcgacaagtgtaagagatcggcttcataacataagacatggcacg
aggaatggagaggcagagatcccgctactcaatggtcttctggctcaataa
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