Rhododendron vialii: 131310729
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Entry
131310729 CDS
T09330
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
rvl
Rhododendron vialii
Pathway
rvl03082
ATP-dependent chromatin remodeling
rvl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131310729
03083 Polycomb repressive complex
131310729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131310729
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
131310729
Histone modification proteins
HAT complexes
HATB complex
131310729
HDAC complexes
Sin3A-HDAC complex
131310729
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
131310729
PRC2.2
131310729
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
131310729
Heterochromatin formation proteins
Other heterochromatin formation proteins
131310729
Chromatin remodeling factors
NuRD complex
131310729
NuRF complex
131310729
NuRF complex (fruit fly)
131310729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
131310729
NCBI-ProteinID:
XP_058193892
LinkDB
All DBs
Position
12a:complement(33634145..33641565)
Genome browser
AA seq
467 aa
AA seq
DB search
MKERGGGKEPTVDERYNQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLY
LSEQTDGSVPNTLVIANCEIVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRE
LPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAQDSRPDLILTGHQDNAEFALAMCPTE
PLVLSGGKDKLVVLWSIHDHISSLAVDPGPAKSPGSGGSSLKNASKVGGSNDKPVDSPTI
GPRGTYQGHEDTVEDVQFCPSSAQEFCSVGDDSCLVLWDARTGSSPVLKVEKAHDADLHC
VDWNPHDVNLILTGSADTSVRMFDRRNLTSGGVGSPVHIFQGHNAAVLCVQWSPDKSSVF
GSSAEDGILNIWDHEKIGKKQENVGTKVPNSPPGLFFRHAGHRDKVVDFHWNSCDPWTIV
SVSDDGESTGGGGTLQIWRMIDLIYRPEEEVLAELDKFKSHILTCSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagaggaggggggaaggagcctacggtggacgaacgctacaatcagtggaag
tctctcgtccccgttctctacgactggctggccaatcacaacctcgtctggccctctctc
tcttgccgatggggtccacagctagaacaagccacttacaagaatcgccagcgtctctac
ctctcggaacagactgatggcagtgtcccaaacacacttgtcatagcaaattgtgaaatt
gttaagcctagggttgctgctgcagaacatatatcacagttcaatgaagaggcacgctct
ccttttgtaaagaagttcaagacaattatacatcctggagaggtaaatcgaatccgggaa
ctaccacagaatagcaagatagtggctactcataccgatagtccagatgtactcatttgg
gatgttgaggcccaacctaatcggcatgctgtgttgggagctcaagattctcgtccagac
ctgatactgacggggcatcaggacaatgcagaatttgctcttgctatgtgccccacagaa
cctcttgtgctatctggagggaaagataaattagtggttttatggagcattcatgatcac
atctcctctttagctgtagatccagggcctgcaaagtctcctggatctggtggttccagc
ctaaaaaatgcatctaaggttggcgggtccaatgataaacccgtagacagtcctactatt
ggaccacgaggtacctatcaaggtcatgaggacactgttgaagatgtgcagttttgccct
tcaagtgcacaggagttctgtagtgttggtgatgattcttgccttgtactatgggatgca
agaactggttccagtccagtcctcaaggttgagaaagcacatgatgccgacctgcactgt
gttgattggaatccccatgatgttaacctcatcctgactgggtctgctgatacttctgtt
cggatgtttgatcgccgaaacctcacttctgggggagttggatcacctgttcacatattt
cagggtcacaatgctgctgtcctttgtgtacagtggtctccagacaaatcatccgtcttt
ggaagttcagcagaggatggcatcttgaacatttgggatcatgaaaagattggtaagaaa
caagaaaatgtggggacaaaagttccaaattctccacctggcttgttcttccgtcatgct
ggccacagggacaaggtcgttgatttccattggaactcgtgtgacccatggacaattgtt
agtgtgtctgatgatggtgaaagtactggtggtggtggtacgctgcagatatggcggatg
atcgacttgatttacaggccggaagaggaggtccttgctgagctggacaagttcaagtct
catatacttacctgttcttcttga
DBGET
integrated database retrieval system
