Rhododendron vialii: 131310819
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Entry
131310819 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131310819
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131310819
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
131310819
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_RanBP
DZR
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
131310819
NCBI-ProteinID:
XP_058194018
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Position
2a:complement(16322564..16330012)
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AA seq
444 aa
AA seq
DB search
MWNCCTKLKHLLSLQTLNPRKTLPHFPPRSMATWTCSKCTFTNPPSQKPNCLICLSPSPS
LSLSPFSSPSSSSAPKWACKACTFLNPYRTTNCEICGARASSALSLHELDEDELDSSIGS
VFLPLRACNKRKNREESAVEIDGARVESGEFRGDKAANKGVILLDDNTLRSASKTLKILS
YNVWFREDLEMHKRMKALGDLIQMHSPDLICFQEVTPNIYDIFQQSSWWKAYRCSVANEM
AFTRSYFCMQLSKLPVKSYSTNPFGNSVMGRELCVAEIKVQEGIPLVVATSHLESPCPAP
PKWDQMFSKERVEQAKEAINSLKKNPNVIFCGDMNWDDKLDGQFPLLDGWVDAWAELRPG
ENGWTYDTKSNQMISGGRTLQKRLDRFVSHLRDFKLRDIDMIGMEAIPGLSYCKDKKVKN
EVKKLVLPVLPSDHYGLLLTISTQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtggaattgttgcacaaaactcaaacacctactctctctccaaactctgaaccctagg
aaaaccctcccccatttccccccaagatcaatggctacctggacctgttcaaaatgcact
ttcacaaaccctccatcacaaaaacccaactgcctcatttgcctatcaccatcaccttca
ctatccctttcgcccttttcttctccttcttcttcatctgctcccaaatgggcttgcaaa
gcctgcacctttctgaacccgtatcgcaccaccaactgcgaaatctgcggtgccagggcc
tcgtcggccttgtcgttgcacgagctcgatgaagacgaattggattcgtcaattgggtcc
gtgtttttgccgttgcgggcctgtaataagagaaagaatcgggaggagtccgcggttgag
attgatggtgctcgtgttgaatcgggggagtttcgcggcgataaggcagcgaataaagga
gtgatcttgttggatgacaatacattgcgaagtgcttccaaaacattgaagattttgagt
tacaatgtctggtttcgggaagacttggagatgcataagaggatgaaagctctgggtgac
cttattcaaatgcattccccagatctgatatgtttccaggaggttacacccaatatctac
gacattttccagcaatcgagttggtggaaagcgtaccgttgctcagttgcaaatgagatg
gcatttacacgatcatacttctgcatgcagctaagcaaactgccagtaaaatcctacagc
actaacccgttcggaaattcggtaatgggaagagaactttgcgttgcggaaattaaagtt
caggaaggcataccattggttgttgccactagccatcttgaaagcccatgtccggcccct
cccaaatgggaccaaatgttcagcaaggaacgcgtagaacaagcaaaggaagccataaac
tctctcaagaaaaacccgaatgtgatcttttgtggggacatgaactgggacgacaagttg
gacggacaatttcctttactggatggatgggttgatgcgtgggccgagttaaggcctggt
gaaaatggatggacgtatgataccaagtcaaaccagatgatctctggaggccggactctg
caaaagcgattggatcgatttgtttcccatttgcgtgatttcaagctgagggacatagat
atgattggcatggaggcaattccgggtctatcatattgcaaggacaagaaagtgaagaat
gaagtgaagaaattggtgctcccagttttgcctagcgatcactatgggttgctattgaca
atttctacccagtaa
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