Rhododendron vialii: 131310870
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Entry
131310870 CDS
T09330
Name
(RefSeq) transcription elongation factor SPT4 homolog 2 isoform X1
KO
K15171
transcription elongation factor SPT4
Organism
rvl
Rhododendron vialii
Pathway
rvl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
131310870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131310870
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131310870
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
131310870
RNA polymerase I system
131310870
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
131310870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
131310870
NCBI-ProteinID:
XP_058194098
LinkDB
All DBs
Position
12a:complement(13803811..13817727)
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AA seq
145 aa
AA seq
DB search
MRSAAAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNF
NGIISVMDPSRSWAARWLRIGMCSFLPPIFVWLSWKHLGFTTYTMIHLCCICRMSELVLI
IIFSVLGSGLHYEPLVYLAFNAESH
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcgcagcagcagcgcagataccaacgagcttcggtcatgagcttagggcatgc
ctccgctgcagacttgtcaagacctacgaccagtttagggaatcaggatgcgagaactgc
cctttctttaagatggatgaagatcatgagcgtgttgtcgattgcaccactcctaatttt
aacgggattatctcagtcatggatccaagcagaagttgggctgctcggtggcttcgtatt
ggtatgtgtagctttttacctcctatttttgtgtggttatcttggaagcatctagggttt
accacttacactatgattcatttatgctgtatttgccgaatgagcgagctagtcttgatc
ataattttctccgttttgggctctggtttacattatgaacctcttgtttatttagccttt
aatgcagaaagtcactga
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