Rhododendron vialii: 131310945
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Entry
131310945 CDS
T09330
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
131310945
Enzymes [BR:
rvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
131310945
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
131310945
NCBI-ProteinID:
XP_058194204
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Position
12a:complement(366405..371573)
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AA seq
649 aa
AA seq
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MSPQGVKLQIQDRHVVIDNGILQVTLSNPEGIVTGISYNGINNLLADESSRSKDKQKGGY
WDVNWDSVDGSKKGGLEVISGTKFEVIMKTEEQVEVSFSRPWEPSLPGDIFVPLNIDKRF
IVLRGSSGFYSYAIYEHLGSPEWPAFSLSQTRIAFKLREEKFHYMAVADNRRRFMPLPED
RDAKNCQRLAYDEAVLLVNPIEPEFKGEVDDKYQYSCENKDLRVHGWISTESPLVGFWQI
TPSDEFRSGGPLKQNLSSHVGPTCLAMFTSLHYAGYDLGPKIGQGEAWKKVFGPVFIYLN
SVVGGESRDDTLTLWEDAKRQMMAEVQSWPYSFPASKDFPSSDQRGNVNGRLLVRDRFIS
KDYISAKGAYVGLAPPGDVGSWQRESKGYQFWTRADENGNFSINHVCTGDYNLYAWVPGF
IGDYRNDVPVTITPGCYIHLGHLVYEPPRDGPTLWEIGIPDRSAAEFYIPDPDPKYINRI
PDRFRQYGLWERYAELYPKEDLVYTVGVSDYTKHWFFAQVTRRKNDNTLQGTTWQIRFKL
DRVDETGTYKLKVALASANQGELQVRVNDPNTKRPLFSSGLIGRDNAVFRHGIHGLYWLF
NVEIPNAVLAKGENTIYLTQARGQSPWRYLMYDYIHLEGPLTMVHKATI
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctcagggggtgaagctgcagattcaagatcgccatgtggtgatcgataacggc
atccttcaagttaccctatcaaatcccgagggtatcgtcactgggatcagttacaacggc
atcaataatttgctcgcagatgaaagcagtagaagcaaggacaaacagaagggaggttac
tgggatgttaattgggattcagttgatggaagcaaaaaaggaggtttggaagtgattagt
ggaacaaagtttgaagtaataatgaaaacagaggaacaagtagaggtgtcattctcaaga
ccatgggaaccctcccttccgggcgatatttttgtccccctaaatatagacaaaaggttt
atagtgcttcgcggttcctcgggcttctactcttacgccatttatgaacatttaggttcg
ccagaatggccagctttcagccttagtcagaccaggattgcattcaagctcagagaagaa
aagtttcactacatggctgtggcagataataggcgaagatttatgccgctgccagaagac
agggatgccaaaaattgccaacgcctggcatatgatgaagcagtcctccttgtaaatcct
atagagcctgagtttaaaggagaggtggatgacaagtaccagtactcctgcgagaacaaa
gatctccgtgtccatggttggatatctacggaatctcctctcgtgggcttctggcaaatt
acgcccagcgatgagttccggtcgggtgggcccctcaaacaaaacctttcctcccatgtt
ggtcctacttgtcttgctatgtttaccagtcttcattatgctgggtatgatctcgggccg
aaaattggacagggcgaggcatggaagaaagttttcggtcccgttttcatatatctaaac
tctgtggtgggtggagaatcaagagatgatacccttacgctctgggaggatgccaaaaga
cagatgatggccgaagtccaaagctggccctattcttttccagcatccaaggattttcca
tcatcggatcaacgtggaaatgttaatggtagattactcgtacgagacagattcataagc
aaggattatatatcagcaaagggtgcctatgtggggttggcccctcctggggatgttgga
tcatggcagagagaatccaagggctaccaattctggacgagagcagatgagaatggcaat
ttttccatcaaccatgtatgtaccggtgactacaatctttacgcatgggttcctggattt
atcggagattatcgaaatgatgttcctgttaccataacaccaggttgttacatccacttg
ggtcatcttgtatatgagcctcctagagatggacccacgttgtgggaaattggcattccc
gatcgctctgctgcagaattttacatacccgatccagatccaaagtatattaacaggatt
cctgacaggtttaggcagtatggattgtgggagagatatgcggagctataccctaaagag
gatttggtctacactgtcggtgttagtgattatacaaaacactggttctttgctcaggtc
actaggaggaaaaatgacaacacgcttcaaggaaccacatggcagatcaggttcaaactc
gacagggtggatgaaaccggaacctacaaattaaaagtggcactagcatctgcaaatcaa
ggcgaattgcaggttcgtgttaacgatccaaacacaaagcgacctctgttttcaagcgga
ctaattgggagggacaacgcagtgtttagacacggcatccacggactatattggctgttt
aatgtggagattccaaatgctgtattggcgaagggggagaatacgatttatttgacacag
gcaaggggacaatcaccttggcggtatctcatgtacgactacattcacttggaaggtccc
ctgaccatggttcataaggccacaatatga
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