Rhododendron vialii: 131311011
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Entry
131311011 CDS
T09330
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00040
Pentose and glucuronate interconversions
rvl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131311011
Enzymes [BR:
rvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131311011
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131311011
NCBI-ProteinID:
XP_058194299
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Position
12a:25534262..25537881
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AA seq
399 aa
AA seq
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MAWRGAEAAPKRSALALAIAVVMLFPTAILAKGASRPSSTTKKSVMNVIDGCWRRDPNWR
HHRQQLARCSVGYAGKMTNNIGPNVTRYKVTDDGDDGLDPRPGTLRYGATRIEGKVWITF
HKDMQIKLEKPLLVSSFTAIDGRGANVHIAGGACLVLLGVTDVIIHGLRIHNCETHEAEE
VMGPEGNVVRIDYPDGDAISVIQSRKVWIDHNTLYECADGLIDVTHGSTDVTVSNNWFRN
HDMVMLLGHHDDYVEDRNMKVTVAFNYFGPDCDQRMPRVRHGFAHVVNNLYQGWGLYAIG
GSTKPSIKSEGNIFIAPNTDLKEITRRIIGNGPRGWKFASTKDLFENGATFTQTGDALVD
VDPRYSRLQAFRVEKAASVRLLTWSAGVLRCRKRSHSKC
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcttggcgaggtgctgaagccgcgccaaagcgttcagctttggcccttgccatagcc
gtagtgatgttgtttccgaccgccattctcgcaaagggcgcgagcagaccatcgtcgacg
acaaagaagtccgtcatgaatgtgatcgacgggtgttggagacgggaccccaactggagg
caccacaggcagcagctggctagatgctccgtgggctatgccggaaagatgaccaacaac
atcggcccgaacgtgacgcgctacaaggtgaccgacgatggggacgatgggttggatccg
agaccgggaaccttgaggtacggagcgacgaggatcgaaggaaaagtgtggatcactttc
cataaggacatgcaaatcaaacttgagaaaccgctcctggttagcagcttcactgccatt
gatggccgaggcgccaacgtccacattgcaggtggtgcatgcctggtattgctcggggtg
acagacgtaatcattcatggtttgagaatccacaactgtgagacgcatgaggcagaggag
gtgatgggtccggaagggaacgtagtgaggatagattatccggacggggatgcgatatcg
gtgatccaatcgcgaaaggtgtggatagaccataataccctctacgaatgcgcggacgga
ctaattgatgtcactcacggctccaccgacgtcaccgtctcgaacaactggttcagaaat
cacgacatggtcatgctcttgggccaccacgatgactatgttgaggaccgaaacatgaag
gtcactgtcgccttcaactatttcggccccgattgcgatcaacgtatgccaagggtccgt
catggattcgcacatgttgtaaacaatctctaccagggctggggcttgtatgcgattggg
ggaagcacgaaaccaagcatcaagagtgaaggaaatatctttattgcaccaaatacagac
ttaaaagagataacgaggaggattatagggaacggaccacgtggttggaaatttgcatcc
acgaaggatttatttgaaaatggagctaccttcactcagacaggcgatgctcttgtcgat
gtagatccacgctacagtcgtctacaggcattccgagtggaaaaggcggcatctgtgagg
ttgttgacatggtcggccggcgtcttacgttgccgtaaaagatcccattctaaatgttga
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