Rhododendron vialii: 131311184
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Entry
131311184 CDS
T09330
Name
(RefSeq) vesicle transport v-SNARE 12 isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
rvl
Rhododendron vialii
Pathway
rvl04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
131311184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131311184
Membrane trafficking [BR:
rvl04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
131311184
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
ETRAMP
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
131311184
NCBI-ProteinID:
XP_058194511
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Position
12a:complement(25052700..25057439)
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AA seq
222 aa
AA seq
DB search
MSEVFEGYERQYCELSANLSRKCSSSGLLLDGAEEKMQKISEVKAGLDDADVLIRKMDLE
ARSLQPSVKAVLLAKLREYKADLNKLKREVKKLSSGNQVSREELLESGMADGQAVSVDQR
QRLAMSTERLNQSSDRIMESRRTMLETEELGVSILQDLHHQRDTLLHSHRKLHGVDDAID
KSKKILTAMSRRMSRNKLIVGSVIAALVLAIILILYFKLSHH
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggtttttgaaggatacgagcgtcagtactgcgagctctctgcgaatttatcc
agaaaatgtagttcatctggtcttcttcttgatggagcagaggagaagatgcaaaagatt
tcagaagtgaaggctggactggatgatgctgatgttttgatacgtaaaatggatctcgag
gcaagaagtttgcagccaagtgtgaaagctgtcctgcttgctaagctaagggaatacaag
gctgatttgaacaagttaaaaagagaagttaagaaactctcatcgggtaatcaggtttcc
cgtgaagagttgttggagtctggaatggcagatggacaagcggtttctgtggatcagcga
caaagactggcaatgtcaaccgagagactaaatcaatcgagcgataggatcatggagagt
agaagaactatgctggagacagaagagcttggtgtctcgatccttcaagatttgcatcat
caacgagacactcttctacattcccataggaagcttcatggggtagatgatgccattgat
aaaagtaaaaagatcttaaccgccatgtctagaaggatgagcaggaacaaattgatcgtt
ggttccgtaattgccgctcttgtccttgccattatccttatcctatacttcaagctttct
catcattaa
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