Rhododendron vialii: 131311286
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Entry
131311286 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131311286
KO
K12874
intron-binding protein aquarius
Organism
rvl
Rhododendron vialii
Pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131311286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131311286
Spliceosome [BR:
rvl03041
]
Complex B
Other components
Prp19-related factors
131311286
Complex C
131311286
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
ResIII
UvrD_C_2
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA
AAA_16
Motif
Other DBs
NCBI-GeneID:
131311286
NCBI-ProteinID:
XP_058194691
LinkDB
All DBs
Position
1a:17017101..17043590
Genome browser
AA seq
1548 aa
AA seq
DB search
MTKVYGTGVYDFRRHRVAEYPAAEKPPESQTGSNLPSAITLVEIQRDRLTKIAAANWSSS
RAGGGEGEEGTPFSEELVKEIYETELAVRGGRKTVPLQRVMILEVSQYLENYLWPNFDPE
TASFEHVMSMLLMINEKFRENVAAWICFYDKKDMFKAFLERVFRLKEGRSLTIAEKTNYL
LFMINAFQSLGDEIVCDNISRLASPQCWHSLSYGRFQMELCLNPDMLKLWKRITKKAREA
TKRGELFDPSTSLEVTFVRNLIQEFLEVLDSNVFPHNQCGSDTMDVNPFEEVDDASVLYC
ERFMEFLTDLLSQLSTRRVLKPLVADVAVVSKCHLSVLYRHEKGKLFAQLVNLLQFYERF
EIDDRLGRQMTDDEVLQSHYNRLQAFQLLAYKKIPKLRELALANIGAINRRSDLSKKLSV
LSPEELRDLVCCKLKLVSKADPWSERVDFLVEVMVSFFEKQQSQKESINALPLYPNEQIM
WDESVVPSINYTGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQEAVPHLL
AHISNEGETAFRGWSRMAVPIREFKVTEVKQPNIGEVKPSSVTAEVTFSISSYRAQIRSE
WNGLKEHDVLFLLSIRPSFEPLSADEAAKATVPQKLGLQYVRGCEIIEMRDEEGTLMNDF
TGRIKRDEWKPPKGELRTVTVALDTAQYHMDCTDIAEKGREDVYSTFNVLMRRKPKENNF
KAILESIRDLMNESCIVPDWLHDIFLGYGNPSAAQWINMPDLLEAVDFKDTFLDVDHVRE
SFSDYQVCFTNSDGTKNLHPKPPFRIRLPKNLKGNTHALAGNDKSAITSVNDANLVDASS
EREQLIVEAYVPPDPGPYPQDQPKQNSVRFTPTQIGAIISGVQPGLTMVVGPPGTGKTDT
AVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMQRDVPARYLLRLGQGEQELATDLDF
SRQGRVNAMLVRRLELLSEVERLARSLQLPEDVGYTCETAGYFWLFHVYSRWELFLDACA
KNQDKPTFVQDRFPFKEFFSNTPQSIFTGQSYEKDMRAAEGCFRHLKRLFQEIEECRAFE
LLKSTVDRSNYLMTKQAKIVAMTCTHAALKRKDFLQLGFKYDNLLMEESAQILEIETFIP
MLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYIELNA
QGRARPSIARLYNWRYRDLGDLPSVKEESIFHRANSGLSYEYQLVNVPDYHGRGETAPSP
WFYQNVGEAEYIVSVYMYMRLLGYPANKISILTTYNGQKLLIRDVIARRCLPYDYIGPPS
KVTTVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLVVAMSRARLGLYVFCRRSLFEQCYE
LQPTFQLLLQRPDLLALNMAEATQFTDRHVEDTGPIHLVSGIEEMETIVNYKIHQAQMMS
NQFPAYLGQVAPQMGASEQNDLQVLGPRHNSDSMDAGKLSLAIGAPEDVQPEGRLDDIPQ
KRTLANGNGDDFPLEGHSNVAANMDVETDDKNGMAHESFSNEESKAEE
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggtgtacggaacgggggtctacgacttcaggcgccaccgcgtggcggagtac
ccggcggcggagaagccgccggagtcgcagacggggtcgaacctgccgagcgcgatcacg
ctggttgagatccagcgggaccggctgaccaagatcgcggcggcgaactggtcctcctcc
agggcgggcggcggggagggggaggaggggacgccgttcagcgaggagctagtgaaggag
atttacgagacggagctggcggtgagaggcggccggaagacggtgccgctgcagagggtg
atgatcctggaggtcagccagtacttggagaactacctgtggccaaatttcgacccggag
acggcgtcgttcgagcatgtcatgtcgatgcttctcatgatcaatgagaagtttcgagag
aatgtggctgcttggatttgtttttatgataagaaagatatgttcaaggcattcctggag
agggtttttcggcttaaagagggaagaagcttaactattgctgagaagacgaattacctg
cttttcatgatcaatgcctttcagagcttgggagatgaaattgtctgtgataacatttca
agattagcaagtcctcagtgctggcacagtctatcatatggtcgttttcagatggagctt
tgccttaatccagatatgctcaagttatggaaaaggattaccaaaaaagctagggaagct
accaaacgaggagagctatttgatccctcaacttcgcttgaagtgacgtttgtgagaaat
ctcattcaagagtttttggaggtacttgattcaaatgtttttccacataatcagtgtggt
agtgatacaatggatgtaaatccatttgaagaagttgatgatgcttccgttttgtactgt
gagaggtttatggaatttcttaccgatctcttgagtcaactctcaacaaggagggtttta
aagccacttgttgctgatgtagctgttgtctccaaatgtcatttaagtgttctatataga
catgaaaaggggaaactctttgcacaattggttaacttgctgcaattctatgaacgtttt
gagattgatgatcgtttagggagacaaatgaccgatgatgaggtgcttcagtctcattat
aaccggcttcaggcttttcaacttcttgcatataagaagattcccaagctgcgggaactt
gcattggctaatattggcgcgattaacaggcgctctgatctgtcaaagaaattatctgtg
ctttcacctgaagagctgagggacctagtctgctgcaagctcaaactggtttcgaaggcg
gatccatggtccgaaagagttgattttcttgttgaagttatggtttcattttttgagaaa
caacaatcgcagaaggagtccataaatgctcttcccttgtaccctaatgagcagataatg
tgggatgaaagcgttgttcctagcatcaattacactggggaagggtgtctggcactccca
aaacttaacttgcagttcttgacacttcatgattatcttcttaggaatttcaacctcttc
cgtcttgaatcgacatatgagatccgtgaagacatccaggaagctgtgccacacctcctt
gcccatattagtaatgagggagaaactgctttccgtggttggtctagaatggctgtacct
ataagggaatttaaggttactgaggtaaaacagcctaatattggagaagtaaagccgtca
tctgtgacagcagaggttactttcagcatttccagttacagagcacaaataagatcggag
tggaatggccttaaagagcacgatgtactctttcttctttctatccgtccttcatttgag
cctctaagtgcagatgaagctgcaaaagcaaccgtgccacaaaagcttggtcttcaatat
gtacgtggatgtgaaattattgagatgcgagacgaggagggaactctcatgaatgatttc
accgggagaattaaacgggatgaatggaagcctccaaaaggtgaactgagaactgtgact
gttgctctggataccgcccaataccatatggattgcactgatatagcagagaaaggcaga
gaagatgtatatagtaccttcaatgtactgatgaggaggaagcctaaggaaaacaatttc
aaagcaattttagaatccataagagatttaatgaatgaatcttgtatcgttcctgattgg
ttgcatgacatatttttgggatatggaaatccttctgcagcacaatggattaacatgccc
gatcttctagaagcagtggatttcaaagatacattccttgacgttgatcatgttagagag
agtttttcggattatcaggtttgttttacaaattctgatggcacaaaaaatttgcatcca
aagcccccttttcgaattaggcttcccaagaatctaaaagggaatacgcatgctcttgct
ggcaatgataagtctgccataacttcagttaatgatgctaacttggtggatgcgagttct
gagagagaacaactcattgtcgaggcttatgttcctcctgatccaggtccatatccgcag
gaccagccaaagcagaattcagttagatttacaccgacccagattggagcaatcatctca
ggcgttcaacccggattaacgatggttgttggtccgcctggtacagggaaaactgataca
gctgtgcaaatcctgaatgtactttaccacaactgtccatctcagagaacgttgataatt
actcattcaaatcaggctttgaatgatcttttcgagaagataatgcagagggatgttcct
gctcgctatcttcttcgacttggtcaaggtgaacaagaattagcaactgatcttgacttc
agtcgacaaggtcgtgtcaatgcaatgcttgttcggcggttagagctgcttagtgaagta
gagaggcttgcaagatctcttcaactgcctgaggatgttggttacacttgcgaaactgct
ggatacttttggttgtttcatgtctactcgcgctgggagctatttctggatgcgtgtgcc
aaaaatcaagataaaccgacctttgttcaggaccgttttccttttaaggagttcttctcc
aatacacctcagtcaatttttacgggccagtcctatgagaaagacatgcgcgcagctgag
ggttgctttcgtcatcttaaaaggctgttccaagaaattgaagaatgcagggcatttgaa
ttgctcaagtcaacagttgatcgatcaaattacctaatgaccaaacaggccaagattgtg
gcaatgacttgcacccatgcagctcttaaaagaaaggattttcttcagttaggcttcaag
tatgacaacctcttgatggaagaaagtgcccaaatcttagagattgaaacttttatccca
atgttgctccagaggcaggaagatgggtatgctcgtcttaaacgctgcatattgattggt
gatcatcatcagttgccccctgttgtgaagaatatggctttccaaaagtacagccatatg
gatcagagtttgttcacaaggttcgtccgtttgggaatcccgtacattgagctcaatgcc
cagggtagagctaggcctagtatagccagactttacaattggagatatagagatctgggt
gatcttccatctgtgaaagaggaatccattttccatagagcaaatagtggattatcgtat
gagtatcagttagtgaatgttcctgattaccatggcagaggtgagactgccccttctcca
tggttctaccaaaatgtgggggaggctgagtacattgtcagtgtctatatgtacatgcgt
ttattagggtaccctgcgaataagatatccatcttgacaacttataatggacagaaactt
ttgatccgtgatgttattgccagacggtgtcttccttatgactatattggtcctcctagc
aaggttaccacagttgataagttccaaggccagcagaatgattttattttgttatctctt
gtgcgtactcggtttgtgggccaccttcgtgatgttagaagattggttgttgccatgtca
cgtgctcgacttggactctatgttttttgtcgccgttctctgtttgaacagtgttacgaa
cttcagcccacttttcaacttctgctccagagacctgatctcctggccttgaacatggct
gaggcaacacaatttacggatcgtcatgttgaagacaccggaccaatccatctggtgagc
ggcattgaagaaatggagaccattgtcaattacaaaatccatcaggcccagatgatgagc
aatcagtttccggcatacttgggacaggtggctccacaaatgggtgcttctgagcaaaat
gacctgcaggttttgggcccacggcacaattccgattccatggatgctggtaaactttct
ttggcaattggtgcaccggaagatgtgcaacctgagggaaggttggatgatataccacag
aagcgaactcttgcaaatggaaatggggatgattttccgctagagggccattcaaatgta
gcagctaatatggatgttgaaactgatgacaaaaatggcatggcacatgaaagcttttca
aatgaagaaagtaaagcagaggagtag
DBGET
integrated database retrieval system
