KEGG   Rhododendron vialii: 131311301
Entry
131311301         CDS       T09330                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
rvl  Rhododendron vialii
Pathway
rvl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    131311301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rvl03400]
    131311301
DNA repair and recombination proteins [BR:rvl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     131311301
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA
Other DBs
NCBI-GeneID: 131311301
NCBI-ProteinID: XP_058194679
LinkDB
Position
2a:complement(17276936..17288430)
AA seq 663 aa
MADSPPQIGFLLPLNDKFEEDTSKPQLPIFQGPNFVGRSCIPAADKRLSRKHLTVTASGD
GSADVLVDGANPIVVRSHAQRKKILSRERGRINHGDIIELIPGHYFFKYVTLATEKKSSS
PNKEKRTLKERSELCEDEVQCVKRKRQVSDDEALARNLQSELYDDNLAQGNSSEGIRHFN
VANENLASTFRLLRVKGLPTWANTSSVSIGDIIQGNPLIAVLSNYMVDIDWLISACPILK
KVPHVLVIHGESDGTLVHMERNKPANWILHKPPLPISYGTHHSKAMLLVYPQGVRVIVHT
ANLIYVDWNNKSQGLWMQDFPWKDQNSSSSGCGFESDLIDYLSTLKLPEFTANLPALGNF
NINSSFFKKFDYSSAMVRLIASVPGYHKGPNLKKWGHMKLRTILQDCIFDKKFHKSPLVY
QFSSLGSLDEKWMSELASSMSSGVSTDKVPLGLGEPLIIWPTVEDVRCSLEGYAAGNAIP
SPLKNVEKDFLKKYWAKWKASHTGRCRAMPHIKTFTRYQGQDIAWFLLTSSNLSKAAWGA
LQKNNSQLMIRSYELGVLFMPSLIKPGCEFSCTDNVNSSQDKDDKTSGSSDAKRTKFVTL
AWHGSKNTDNSSEVIPLPVPYELPPKPYSSEDVPWSWERRYHKKDVYGQIWPRHVQLYTS
QDS
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggccgattctcctcctcagattgggttcttgctccctctgaacgacaaattcgaagaa
gatacttcgaaacctcaattaccgattttccaaggccctaactttgtcggtcgcagttgt
attccggccgccgacaagagactcagccgcaagcatctcacagtaaccgcctccggcgac
ggctctgccgatgtccttgtggatggagcaaacccaattgttgttcggtcccatgcccaa
aggaagaaaattttgtctcgagaaagagggagaattaaccatggtgatattattgagttg
atacctggccattattttttcaagtatgtaaccttggccactgagaagaaatcatcttca
cccaacaaggagaagaggactctaaaggaacgtagtgagctttgtgaagatgaggtgcaa
tgtgtgaagaggaagaggcaagtgtctgacgatgaagctctagcaaggaatttgcagtct
gagctgtatgatgataacctagcccaaggcaactcttcagaaggcatccgtcactttaat
gttgctaatgagaacttagcttctactttccgacttctgcgagtgaaaggacttccgact
tgggccaatacctcttctgtatctattggagatattattcaggggaatccgctcatagct
gtcctttcaaattacatggttgacatagattggttgatttctgcatgtccaatacttaaa
aaggtccctcatgtgctggtcattcatggagagagtgatggaacactggtgcatatggag
agaaacaagccagcaaattggattctgcataaaccacccttgccaatttcatatggaacc
caccattcaaaagccatgcttcttgtttatcctcaaggagtgagagttattgtgcataca
gcaaacttgatctatgtcgactggaacaacaaaagccaaggtctgtggatgcaagatttc
ccgtggaaggatcaaaatagttctagcagtggatgtggatttgagagtgacctgattgat
tatctatctacattgaagttgcctgaatttactgctaatctaccagctcttggcaacttc
aatatcaattcatcctttttcaagaagttcgactacagtagtgcaatggtgaggttaatt
gcatctgttcctggatatcataagggtcctaatttgaaaaagtggggacatatgaagttg
cgtaccattctccaggactgtatcttcgacaaaaagtttcacaagtctcctcttgtttat
cagttctcttctcttggttctttggatgagaagtggatgtctgagctagcatcctcaatg
tcgtcgggagtctcaacagataaagtccctctgggtttaggggagcccctaataatatgg
cctacagttgaagatgtcagatgttcactagagggttatgctgctggaaatgccattcca
agccccctaaaaaatgtggagaaagacttcttaaaaaagtattgggcaaagtggaaggca
agccatactggacgctgccgtgcaatgcctcatataaagacattcacacgttatcaaggt
caagacatcgcgtggttcttgctaacttcatcaaatctaagcaaagctgcatggggagct
ctccagaaaaacaactctcagttgatgatccggtcctatgagcttggagtgctctttatg
ccgtctttgatcaaacctggttgtgaattttcgtgtacagataatgtgaattcatcgcag
gataaagatgacaaaacgtcaggaagttctgacgcaaagagaacaaagtttgtaacccta
gcttggcatggaagtaagaacacagacaactcatctgaagtaattccgttgcctgtgcct
tacgaacttcctccaaaaccgtactcctctgaagatgtcccgtggtcgtgggaacggaga
tatcacaagaaggatgtctatgggcaaatttggccaagacatgttcaactgtacacttcc
caagattcctaa

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