Rhododendron vialii: 131311311
Help
Entry
131311311 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131311311 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvl03016
]
131311311
Enzymes [BR:
rvl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
131311311
Transfer RNA biogenesis [BR:
rvl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
131311311
Prokaryotic type
131311311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
131311311
NCBI-ProteinID:
XP_058194694
LinkDB
All DBs
Position
12a:complement(28699..33764)
Genome browser
AA seq
334 aa
AA seq
DB search
MPKNVKGIIHKGRSYAASVELPALLNLRHSSSSIDDDSYNLGGRREDPNQAGYKWRMVIA
YDGTRFSGWQYQPPPPTIQSIVEKALTEITKQERRDLHLVGASRTDTGVHAWGQVAHFVT
PFNYDRLDSIHAALNGLLPSDIRIREISPAAPEFHARFSAKSKIYHYKIYNSSIMDPFQR
HYAYHNVYKLNSDVMREAAKHFIGKHDFSSFVNASHNDRSPDPVKKIFRFDITEMGPLLQ
LEVEGSGFLYRQVQNMVALLLQIGREAIPPDIVPKILATRNRKELAKVALPAPPHGLCLV
SVSYNEEHLRLPAGCSSISFGRHHSISKCKLPFF
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaaacgtgaaggggattatacacaaagggcggagttatgcagcgtcggtagaa
ctgcctgctcttctcaatttgaggcactcatcttcctcaatagacgatgactcgtataac
ttgggcggccgcagggaggatcctaatcaagcaggctataagtggcgcatggttatagcc
tatgacggcactcgattttcaggttggcaatatcagccgcctccgccaaccatacaaagc
attgtggagaaagctttaactgaaataacaaaacaagaacggagggatctccatttggtt
ggagcaagtagaaccgatactggagtccatgcgtggggtcaggtggcacactttgttact
cctttcaactatgacagattggatagcattcatgcagccctaaatggtcttcttccttca
gatatccgaatcagagagattagccctgcagcgcctgaatttcatgctcgattttcagca
aagagcaagatttatcactacaaaatatacaacagcagtatcatggacccatttcagcgt
cactatgcttaccataacgtttataaactaaatagtgatgtcatgagggaagctgcaaaa
catttcattgggaagcatgacttttcttcttttgtcaatgcatcacacaatgatcgatca
ccagatccagtgaagaagatattccgctttgatataactgaaatgggacctcttttgcag
cttgaagtcgaaggctctggcttcttatatagacaagtgcaaaacatggttgctttattg
ctgcaaatcggaagggaagcaattccacctgacatcgttcccaaaattttggcaactcga
aatcgcaaggagcttgcaaaggttgctttacctgctccaccgcatggcctgtgtcttgta
agtgtcagttacaatgaagaacacttgcggcttccggcaggttgctcttcaattagtttt
ggtaggcatcatagcataagcaaatgcaagctaccatttttctaa
DBGET
integrated database retrieval system
