Rhododendron vialii: 131311326
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Entry
131311326 CDS
T09330
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
rvl
Rhododendron vialii
Pathway
rvl03430
Mismatch repair
rvl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
131311326
03460 Fanconi anemia pathway
131311326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131311326
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
131311326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
131311326
NCBI-ProteinID:
XP_058194713
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Position
12a:complement(795637..809006)
Genome browser
AA seq
754 aa
AA seq
DB search
MESETTEQSLLMEIDEEDEEVEVVVEEEAVPTPLVQEPPKIHRLDESVVNRIAAGEVIQR
PVSAVKELVENSLDAGSTSVNVVVKDGGLKLIQVSDDGHGIRFEDLPILCERHTTSKLSK
FEDLQSIRSMGFRGEALASMTYVGHVTVTTITKGQLHGYRVSYRDGVMEHEPKACAAVKG
TQIMIENLFYNMTARRKTLQNSADDYPKIVDLLSRFAIHHTNVSFSCRKHGAARPDIHSV
ATASRLDAIRSVYGVSVARNLMSIEVSDDDPSSSVFKMDGFISNSNYIAKKITMVLFING
RLVECSALKRAIEIVYMATLPKASKPFIYMSVVLPPEHVDVNVHPTKREVSLLNQEIIIE
KVQSAVESKLRTSNESRTFQEQVVDPSPSSPMVIIKDSQTKPSASGTKSQRVPVHKMVRT
DSQDPAGRLHAYLQVNPSSLQEKSASLTSVRSSIRQRRNPKETADLSSIQQLIDDIDNSC
HSALLDILRHCTYIGMADDVFALLQYNTHLYLANVVNLSKELMYQQVLRRFAHFNAIQLS
EPAPLSELILLALKEEDLDPECSEKDQLNEKIAEMNTEMLKQKAEMLEEYFGIYVDSQGK
LSRLPVILDQYTPDMDRVPEFVLCLGNDVDWDDEKSCFQSIAAALGNFYAMHPPLLPNPS
GDGLQFYKRRKPFRSTQAEEIPSKSTEDHAMEGDIDQELISEAETAWAQREWSIQHVLFP
SMRLFFKPPTSMATNGTFVQVASLEKLYKIFERC
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaaaccaccgaacaatctctcctaatggaaatagacgaagaagatgaagaa
gtagaagtagtagtagaagaagaagcggtgcccactccattagtacaagagccaccgaag
atccaccgcctggacgagtccgtggtgaaccgaatcgccgccggagaagtgatccagcgg
ccggtctccgccgtgaaggagctggtcgagaacagcctcgacgccggctccacctccgtc
aacgtcgtcgtcaaggacggcggcctcaaactcatccaagtctccgacgacggccacggc
atccgttttgaggatttgccaatactatgcgagaggcacacgacatccaagttgtctaag
tttgaagatttgcagtcaattcggtcgatggggtttagaggagaggcattagccagcatg
acctatgtgggtcatgtaaccgtcaccaccattaccaaaggccaattgcatggttatagg
gtgtcatatagagatggtgtaatggagcatgagcccaaagcatgtgcagctgtaaagggg
acgcagataatgatagagaacttattttataacatgactgctcggaggaaaacacttcag
aactctgctgatgattatccgaaaattgtagacctactaagtcggtttgccattcatcac
acaaatgtgagcttctcttgcagaaagcatggagctgctaggccagacattcattcagtt
gccacagcctcaaggctcgatgcaattaggtctgtttatggggtgtcagttgctcgcaat
ctgatgagtatagaagtttcggatgatgatccttctagttcagttttcaagatggatggt
tttatctccaactctaactacattgctaagaagataacaatggttctttttataaatggt
cgattagttgagtgcagtgctttaaaaagagctattgaaattgtttatatggcaacctta
cccaaagcatcaaagcccttcatttatatgtcggttgtattgccacctgagcatgttgat
gtgaatgtacacccgacaaagcgagaggtaagccttttgaatcaggaaattatcattgaa
aaggtacagtccgcagtggagtcaaaattgagaacctccaatgaatcgagaacatttcaa
gaacaggtggtagatccctctccatctagtcctatggttatcatcaaagattcgcaaaca
aagccctctgcttctgggacgaaatcacaaagagttccagtccacaaaatggtacgaaca
gattcacaggatcctgccggaaggctgcatgcttacttgcaagttaatccttctagcctt
caggaaaagagtgctagtttgacatctgtcaggtcttctatcagacaaaggaggaacccg
aaggaaactgctgatctctctagtattcagcagcttattgatgacattgataacagttgt
cattctgctctgctggacattttaagacactgcacatatattgggatggcagacgatgtg
tttgctctgcttcagtataacactcacttatatcttgctaatgtagtgaatttgagcaaa
gaactcatgtatcagcaagtccttcgtcggtttgctcacttcaacgcaatacaacttagt
gaaccggcccctctgtctgagcttattttgctagcactgaaagaggaggatttagaccca
gaatgcagtgaaaaggatcaactgaatgaaaagattgcagaaatgaatacagagatgctc
aagcaaaaagctgaaatgctagaggaatattttggtatttatgttgattcgcagggtaaa
ttgtccaggcttcctgtcatacttgaccagtacactcctgatatggacagggtccccgaa
tttgtactttgtttgggcaatgatgttgactgggatgacgagaaaagttgtttccaatca
attgctgctgctcttgggaacttctatgccatgcatcccccattgttacccaatccatca
ggtgatggtttgcaattttacaaaaggagaaaaccgttcaggagtacccaagcagaagaa
atccccagtaagagtactgaggatcatgcaatggagggcgatattgaccaggaactaatt
tctgaggcagagactgcatgggcccagcgtgaatggtcaatccagcatgtcttgtttcca
tccatgagacttttctttaagccaccaacttcaatggctacgaatggaacatttgtccag
gtcgcttcgctggagaaactttacaagatttttgaaaggtgctaa
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