KEGG   Rhododendron vialii: 131311415
Entry
131311415         CDS       T09330                                 
Name
(RefSeq) sm-like protein LSM1B isoform X1
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
rvl  Rhododendron vialii
Pathway
rvl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    131311415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rvl03019]
    131311415
Messenger RNA biogenesis [BR:rvl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     131311415
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     131311415
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 131311415
NCBI-ProteinID: XP_058194858
LinkDB
Position
12a:35146007..35150840
AA seq 135 aa
MSWAGPEDIYLSTSLASYLDKKLLILLRDGRKLLGMLRSFDQFANAVLEGACERVIVGEL
YCDIPLGLYVIRGENVVLIGELDLEKEELPSHMTRVSEAEIKRVSVIFGVLKLHIFGKII
EYHDALPVLLLRHLS
NT seq 408 nt   +upstreamnt  +downstreamnt
atgtcttgggcaggaccagaagatatctatctatctacttctcttgcaagctatcttgat
aagaagcttcttatattgctgcgagatggtagaaagttgttgggaatgcttcgttctttc
gatcaatttgcaaatgctgttctagaaggtgcatgtgagcgagttattgtaggtgaactg
tactgtgacattccattaggtctatatgtaatccgtggcgagaatgtcgttttaatcggc
gaactggacttggaaaaggaggagcttccttcacatatgactcgcgtatcagaggcagag
ataaaaagggtaagtgttatttttggtgtcctcaaactgcatatatttgggaagattatt
gagtaccatgatgcactgcctgttctcttgctgaggcacttatcgtag

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