Rhododendron vialii: 131311694
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Entry
131311694 CDS
T09330
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00040
Pentose and glucuronate interconversions
rvl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131311694
Enzymes [BR:
rvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131311694
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131311694
NCBI-ProteinID:
XP_058195223
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Position
12a:complement(29808054..29811329)
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AA seq
404 aa
AA seq
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MASPSLLSLIFLLSVLTPALISSSEVQDPELVVQDVHRSINASRRNLGYFSCGTGNPIDD
CWRCDSKWEKNRQRLADCAIGFGKNAVGGRDGKIYVVTDSSDHDVVNPKPGTLRHAVIQD
EPLWIIFARDMVIKLKEELIMNSFKTIDGRGSSVHIAGGPCITVQFVTNIIIHGINIHDC
KQGGNAMVRDSPRHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCKDGLIDAIHGSTAITI
SNNYMTHHDKVMLLGHSDSYSQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSASPTINSQGNRFLAPNNRFSKEVTKHEDAPESKWKHWNWRSEGDLMLNGAY
FTPSGAGASSSYARASSLGARPSSVVGSMTIGAGALNCRKGSRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccttcactcctctctctcatcttcctcctctctgtcctaacccccgcactc
atttcctcctcagaagttcaagaccctgagctagtagtacaagatgtacacaggagcatc
aatgcatcgaggaggaacttgggatatttttcatgcgggaccggaaatcccatcgacgat
tgctggcggtgcgactcaaagtgggagaaaaaccgccagcggctcgccgactgcgccatt
gggttcggcaagaatgccgttggaggacgagacggtaaaatctacgtggtcaccgactcc
agcgaccacgacgtggtgaaccccaaacccgggaccctccgccacgcagtcatccaagac
gagccgctgtggatcatcttcgcgcgcgacatggtgatcaaactgaaggaagaactgatc
atgaactcgttcaagacgatcgacggccggggatcgagcgtccacattgcgggagggccg
tgcatcaccgtgcaattcgtgaccaacatcatcatacacgggatcaacatccacgattgc
aagcagggagggaacgctatggtgcgggactcccctcggcactacgggtggaggacggta
tcggacggcgacggggtgtcgatcttcgggggcagccacgtgtgggtggaccattgctcg
ttgtcgaactgtaaggacgggctgattgatgcgattcatgggtccacggctatcaccatt
tcgaacaattacatgacgcaccatgacaaggtcatgctgctgggccacagcgattcgtat
tctcaggataagaatatgcaagtcacgattgcttttaatcactttggggaaggtcttgtt
caaagaatgccaagatgtagacatggttacttccatgtggtgaacaatgactacacccat
tgggaaatgtatgccattggagggagtgcttcccccactatcaatagccaaggcaacaga
tttcttgcccctaataacagattcagcaaagaggtgaccaaacatgaggatgcaccagag
agtaaatggaagcactggaattggagatcagaaggagacctgatgttgaacggcgcatat
ttcaccccatctggtgctggagcttcatcaagttatgccagagcctcaagtttgggtgca
aggccatcttccgtcgtcggttcaatgacaatcggcgcaggtgcactgaactgcagaaag
ggttcccgctgttga
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