Rhododendron vialii: 131311741
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Entry
131311741 CDS
T09330
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
rvl
Rhododendron vialii
Pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131311741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131311741
Spliceosome [BR:
rvl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
131311741
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
131311741
NCBI-ProteinID:
XP_058195290
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Position
12a:complement(23150529..23162416)
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AA seq
485 aa
AA seq
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MATLADSFLADLDELSDNEANLPCEDNVDTENMEEDVDGDMVDIENLNYDDLDSVSKLQK
TQRYIDIMKKVEDALEKGSDMSDNGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEEVLQKTIDACDRALVLDSSKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQAEILQSTPPSLRMRACRLLASK
STLAARVDSIRGDPTGKTGRAFRDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKMANRMQFGVPEESSLGDGLGEGYGMLGQAGNGRLRVSVGQSKLAA
KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELSNPQAHANQLGSGTQSTYFSEIGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttccttgctgacctcgatgaattatctgacaatgaagct
aatcttccttgtgaagacaatgtcgatacggaaaacatggaagaagacgtagatggggac
atggtagatattgaaaatcttaattacgacgatctagacagtgtctctaaattacagaaa
acacagcggtacattgatatcatgaagaaagttgaagatgctcttgaaaagggatcggat
atgtcagataatggcatagttctagaagacgatcccgagtaccagctaatagtggactgc
aatgcattgtcagttgacattgagaatgagattgttatcatccataattttatccgagat
aagtatcggctgaaatttcctgagcttgaatcacttgttcatcaccctattgattatgct
cgagttgttaaaaagattggcaatgagatggacttgaccctcgttgatctcgaaggactt
ctaccctcggcaattatcatggtggtttcggttacagcgtcaaccactagtggtaaacca
cttccggaggaagtccttcaaaagacaattgatgcatgtgatcgtgctcttgttcttgat
tcatcaaagaaaaaggtccttgatttcgtggagagcagaatgggatatattgcgccaaat
ctttctgctattgttgggagtgcagttgcggcaaaacttatggggactgctggtggtcta
tcagcattagctaagatgcctgcttgcaatgttcagctcctcggtgctaagaaaaagaac
ttagcaggtttttctactgcaacatcccagtttcgcgtgggttatattgaacaggcagag
atacttcaaagtacacccccttctctaaggatgcgtgcctgccggctactggcttcaaaa
tcgactcttgcggcacgtgttgattctattagaggagatccaactgggaagacagggaga
gccttccgcgatgagattcataagaaaattgaaaagtggcaagagccacctccagcaaag
caacctaaacctcttccagttcctgattctgagcccaagaaaaagagaggtggccgtcgg
ttgaggaagatgaaggaaagatatgctataacggacatgaggaagatggctaataggatg
cagtttggtgtccctgaagagagttccttgggtgatggacttggagaaggatatggtatg
cttggtcaggctgggaatggaaggttgcgtgtatcagtgggtcaaagcaaactcgctgca
aaagtagctaaaaagttcaaggaaaagaactatggaagcagtggtgctacctcaggactt
acttcaagtttggcctttacacctgtgcaggggattgagctgtcaaatccacaggcacat
gcaaatcagcttggcagtggaactcaaagcacctacttttcagaaataggcacattttca
aagatcaagaggacctga
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