Rhododendron vialii: 131311792
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Entry
131311792 CDS
T09330
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131311792
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
131311792
Surveillance factors
Other surveillance factors
131311792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
131311792
NCBI-ProteinID:
XP_058195347
LinkDB
All DBs
Position
12a:2949624..2959726
Genome browser
AA seq
1632 aa
AA seq
DB search
MAQRKLDLPDDLLSSKPSDLSSIANVKASGGNEDEKGLIGILDDQKGTSDQAALESNIPL
SPQWLYVKPSETKMEARAPSSLSLGSPADPNQKESWRADVPDDKIDRRRIASETETGRRW
REEERETGLLGRKDRRKTDRRVDNTSVRENSDSRVLANDKWQDVNNRSSGHDTRRDNKWS
SRWGPEDKEKESRIEKKTDAEKEDAHSDCQPLSVSNPRAVPERDTDSRDKWRPRHRMEGS
SSGPGSYRAAPGFGLERGKPEGSNVGFTLGRGRSSVSVVRPPSAGSLGAALFDRTVNVPG
KPSSSADTFCYPRGKLLDIYRKQKLDTSFAMMLDQMEEVPAITQVNVIEPLAFVTPDAEE
AAILGDLGKGKITSSGVSYSPFRKGRSTDNITDVGDLELTNGKHGMLPSVMSDEVVDAFG
RAVNNDTRWASVSSSLDNEDPKTKLKDDTDREGERKVSAATSGTNADELMQAISRSMDFF
SVKDSNGAHFDDASQLKGADSVFTKHPSLNDLRSAAAFDISTKLLDDSTSLFFPQSSEEN
WSGNMQHFQGSHNEYRSEGGILPEEMSLYYLDPQGEIQGPFLGVDIISWLEQGFFGTDLL
VRLEDAPEGTPFRELGEVIPHLRVTDGHAFSVDMNSNVEEHGAIEEKMGPSLMASAPVPE
MTQLSALNDHSWQSSRFDGIPNQHEHSRQLAHTEGQGFRDFVGQDEDVLFPGRSEIGGNP
LGATSLGINNPSANPMSNPSHPVEFTEPGVPSPSNNKLHPFGLSWSELEGNYTSHNETSN
GSAQDQLFNPSMGRIGSFGALADSTNAVETWSDVHGRNTVPGPNVYQGAMDAHRASHMDQ
ESIRFRATEKLLLQQYQQQLQQRNLLTHPHLNESVLEQVPSQHYSNQTGPHLDHLLALQQ
QQQQQQQWLRQQHHQLQQKQQLHQQHLILLQEQQQQSQARQLLREQLLLQSQMQDSGRGM
SHVDAVRTTNALEQVLLKQQILHELQQRSLHPPRHADPSLDHLIQAKFGQTQHQSDLLEL
VSRSKRGQMHTLESQILQQEQLYGRQLPMGLRQQVEMEEERHGGSNWPVDETNQFLRSPA
AAHRAHSAGFGPLDFFQQQRPSSKEQLVQVDRNFSLQDRLQRGLYDPGLSPLERQMSMSG
GAPGMSLDAVNALTHGQGLDIQEPRARMHSAGQVGGFSSGIHSHHPSISNQFHASPSDSI
ETHWSETNGQLPNDWMKSRIRQLHLNAELQNRESEVKMASEDPNLWMSTGTSNDNSKRLL
MELLHKKSVSQTADSLDTSNEASYERRAPSGRYSETSSSNHSFSFLSGQQAGINHQFALG
PYGSNSGGTPSVQLTDENASAVESSGRLPLRSKSEVLSDRDQFLSGFDETSQAIFSNPNM
ISKKSMEREFLDVDRKKQGFKTEVHMMKGPSSEIQEDRTDQESFAAINCGETPINIISRH
NSLGFAGGNIASFNDKVALSDSFVEDVSKGRLPSLASKGSDSFLLKRPPVSQNSSQEGLA
ELASDTVLRGKHLSSSVPSEGARRESGGHLANQSSDIQIPGKKDLHFRQISSGSDDTDIS
EPSFIDMLKSNAKKPPQTESAGAGASESSDGSQAARSAKKKGKKGKQIDPALLGFKVTSN
RIMMGEIQRADD
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacgcaagcttgatctccccgatgatctcctctcatccaagccgtccgatctc
tcttcaattgccaacgtgaaagcttcaggagggaatgaggatgagaagggcttgataggg
atacttgatgatcagaaaggtacttcagatcaagcagcattagaaagcaacattcctttg
tctccccagtggctttatgttaaacctagtgagacgaagatggaagcacgtgcaccaagt
tctctttctctgggaagtcctgctgatcccaatcagaaggagagttggcgtgcagatgtt
cctgatgacaaaatagatcggagaagaattgcatccgagactgagactggtcgccgctgg
cgagaagaagaaagggaaactggcttgcttggtagaaaagatcgtaggaagacggatcga
cgtgttgacaacacctcggttagagaaaactctgattctagagttttagcaaatgacaag
tggcaggatgttaataatcgaagttctggacatgatacacgacgtgataacaagtggtcg
tctaggtggggtccggaagacaaagagaaggaatcccgaattgaaaaaaagacagacgca
gagaaggaagatgctcacagcgattgtcaaccactttcggttagcaatccccgtgcagtt
cctgagcgggacacagattctcgcgataagtggaggccacgccataggatggagggaagt
tctagcgggccaggttcctaccgtgctgcacctgggtttggacttgagagaggaaagcca
gagggttctaatgtggggtttacattaggacgaggaagatctagcgtttcagttgtgaga
cctccatctgctggttcacttggtgctgctctatttgacaggactgttaatgttcctggg
aaaccaagctcctcagctgatactttttgctacccaagggggaagcttcttgacatttac
cgcaagcaaaaactggatacatcttttgctatgatgcttgaccagatggaggaagtacct
gctataacacaagttaatgtcattgagccattggcctttgtcactcctgacgcagaagag
gctgctatcctcggtgatctagggaagggtaaaatcaccagtagtggggtgtcatacagt
ccatttagaaaaggaagatcaactgataacattacagatgtcggagacttggaactgacc
aatgggaaacatggtatgcttccctcagttatgtctgatgaggttgttgatgcctttgga
cgagctgtgaataatgatacccgctgggctagtgtttctagctccttagacaacgaggat
cctaaaacgaagttgaaagatgataccgatcgtgagggagaaaggaaagtttctgcagct
acttcagggacaaatgctgatgaattgatgcaagcaatttcaaggagtatggatttcttc
agtgtgaaagacagtaatggtgctcactttgatgatgcttctcagctcaaaggggcagat
tctgtgttcacaaaacatccttctctcaacgatcttcgttctgctgctgcttttgatatc
agtaccaagcttctggatgattccacttctctattttttcctcagtcttccgaggagaat
tggagtggcaatatgcagcactttcagggcagccacaacgaatatcgatcagaagggggt
atcctgcctgaggagatgagtttgtattacctagatccccagggagagatccaaggacca
tttcttggggttgacatcatttcatggttagagcaagggttttttgggaccgatttgctg
gtccgtttggaagatgccccagagggaacgcctttccgagagttgggtgaggtcatcccg
catctaagagttacagatggacatgcctttagcgttgatatgaattctaatgtagaagaa
catggagctatagaagagaaaatgggccctagtttaatggcttctgcccctgttcctgaa
atgactcaattgtctgcattaaatgaccatagctggcaatcgtctaggtttgatggtata
ccaaatcagcatgaacattcgcggcaactcgcacatacagagggtcaaggctttcgtgat
tttgttggtcaagatgaagatgttttattcccgggaagatctgaaataggtggcaatccg
ctcggagcaacttctttgggcatcaacaatccttctgctaatcccatgagcaatccgtct
catccggttgaatttacagagcccggtgtccctagtccgagtaacaataagttgcatcct
tttgggctttcgtggtcagagcttgaaggcaactatacaagccataacgaaacatcaaac
ggtagtgctcaggatcagcttttcaaccctagcatgggaagaattggctcttttggtgca
cttgctgattcaactaatgctgtagagacatggtctgatgttcatgggagaaatacagtt
cctggccccaacgtgtatcaaggagccatggatgctcacagggcctcacatatggatcaa
gaatctatccgctttcgtgccacagagaagcttttgttgcaacaataccaacaacagctc
cagcagcgcaatctgttgactcatccccacctgaatgaatcagtgctggaacaagtgcca
agtcagcattacagcaatcaaacagggccacatctggaccaccttttggcactacagcag
cagcagcagcagcagcagcaatggcttcggcagcagcatcaccagttgcagcaaaagcag
cagttacatcaacaacatctaattctgttgcaggagcaacaacagcagtctcaagctcga
caactgcttcgtgagcagttgctgctgcagagtcaaatgcaagattctggccgtggaatg
tctcacgttgatgctgttagaacaaccaatgctcttgaacaagttttgttgaagcagcaa
attttgcatgaactacaacagcgttcccttcatcctccaaggcatgctgatccatccctt
gaccatcttatccaagcgaaatttggtcaaacgcagcatcaaagtgacctgttggagctt
gtatcacgttcaaagcgaggacagatgcacactttggaaagtcagattcttcagcaagaa
caactttatggaagacagttgccaatggggttgaggcagcaggtggaaatggaagaagag
aggcatgggggctctaactggcctgttgatgaaaccaatcagttccttagaagtcctgct
gctgcacatagagctcactctgctgggtttggaccattagatttttttcagcaacagaga
ccatcctctaaggagcagctagttcaagttgaccgcaatttttccctacaagaccgatta
cagcgaggcctttatgaccccggtttatcgccattggagcgacaaatgtctatgtcaggt
ggcgctccaggaatgagtctggatgcggtgaatgccttgactcacggtcaaggtttagat
atccaggaaccaagagcccgaatgcactctgctggtcaagtgggtggattctcctctggt
atccactctcaccacccttcgatttccaatcagtttcatgcttcaccctctgattcgatc
gagacccactggtctgagaccaatggtcagctaccaaatgattggatgaaatctcgaata
cggcaattgcatctcaatgcggagctgcagaatagggagtcagaagttaaaatggcttcc
gaagatccaaatttatggatgtcaactggaacaagcaatgacaattcaaagcgtttgctt
atggaattgcttcataaaaaatcagtctctcaaactgccgattcattagatacaagtaat
gaagcatcttatgagagaagggcaccttcaggtcgctattctgaaacaagctcttctaat
cattccttcagcttcttatctggtcaacaagctggtataaatcaccagtttgccttagga
ccttatggttctaattcaggtggaacaccgtcagttcagttgacggatgagaatgctagt
gctgtggaaagcagtggaagactcccccttagatccaagtctgaagtattaagtgataga
gatcaatttctttcgggttttgatgaaacttctcaagcaattttctcaaatcccaacatg
attagtaagaagtctatggaacgagagttcttagatgtggaccggaaaaagcaaggattc
aaaactgaggttcatatgatgaagggaccatcttcggagattcaagaagataggactgac
caggaaagctttgctgctataaactgtggcgaaacacccattaatataattagtaggcat
aattcacttggctttgctggtgggaacattgcctccttcaatgacaaagttgcgctttct
gattctttcgtggaagatgtttcgaagggccgtctaccatcccttgcatcaaaagggtcg
gacagttttttgctgaagcgtccacctgtctcacaaaattcatctcaagaaggattggct
gagctggcctctgatacagtcttgcgaggcaaacacctttcatcttctgttccttcggaa
ggggcaagacgggaatccgggggacatctagcgaaccaaagttctgatattcagatacct
ggcaagaaagatttacattttcgacaaatctcatctggcagtgatgataccgatatctca
gagccatcgttcattgacatgcttaagagtaatgccaagaagccaccacagacagaatct
gcaggagcaggagcatccgagtcgtcggacggttcacaggcagcccgcagcgcgaaaaag
aaagggaagaaggggaagcaaattgatcctgcccttcttgggttcaaggtgacaagcaat
cgcatcatgatgggtgaaatacaacgggcggatgattaa
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integrated database retrieval system
