Rhododendron vialii: 131311902
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Entry
131311902 CDS
T09330
Name
(RefSeq) protein transport protein SEC24 C isoform X1
KO
K14007
protein transport protein SEC24
Organism
rvl
Rhododendron vialii
Pathway
rvl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131311902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131311902
Membrane trafficking [BR:
rvl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
131311902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Transposase_1
Motif
Other DBs
NCBI-GeneID:
131311902
NCBI-ProteinID:
XP_058195520
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All DBs
Position
12a:25538991..25568194
Genome browser
AA seq
1105 aa
AA seq
DB search
MATPGVPRPGNAPPYYNPSSVTDGMQNLQINRPTGPPGYVGPRPPTPLGQQPPPPFSSSA
QRPSSFSGSFPMTRPGAPPPGVLPGGPLQATLPQNVASYRPSGPPPPFGSRPPPPGSLPS
SMSTSGVPPGAFPSTGQVAPPSSHPNLSPFGSSSPLTTGPIFPPSSTPGPASNGPPAFGS
GGMQRGPQFSSAGSPPPPLSSRQVGPAPSPVPFTRAPSPVPFTRAPSPVPNMRPLHGSPP
TGAPSGPMQPPPFALPFPSGMPPPSGSLPFAAPPQGVAPPSGSPYGQQAWQMQPRQVAPA
PPIPGSSQPPRMFGMPPQPPDQSMATISPAMGHMGAPMAGPSKIDPNQIPRPIPSISVIL
HETRQGNQANLPPPATSDYIVKDTGNCSPRYMRCTINQIPCTVDLLTTSGMQLALMVQPL
ALPHPSEEPIQLVDFGESGPVRCSRCKGYVNPFMKFIDQGRRFVCNLCGYTDETPSDYQC
NLGPDGRRRDADERPELCRGTVEFVATKEYMVRDPMPAVFFFLIDVSMNAIQIGATAAAC
SAISQVIADLPDGPRTMVGVATFDSTIHFYNLKRELQQPLMLIVPDVQDVYTPLQADVIV
QLSECRQHLELLLENIPTMFENNRTADSAFGAAVKAGFLAMKNTGGKLLVFQSVLPSVGF
GALSAREAEGRTNISAGEKEAHKLLQPADKVLKAMAVELAEYQVCVDVFITTQTYVDIAS
ISVIPRTTGGKVYYYFPFSALSEPAKLYNDLRWNVTRPQGFEAVMRVRCSQGIQVQEYSG
NFCKRIPTDVDLPTIDCDKTIMVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVSTLS
LPCTTLLSNLFRSADLDTQFACFLKQVANEIPSSPLPQVREQVTNLCINILHSYRKFCAT
VSSAGQLILPEALKLLPLYTLALIKSTGLRTDGRIDDRSFWISYVSSISTALAIPLVYPR
MVAIQDLISKETDGSIIPPSIPLSSEHVNDDGIYLLENGEDCLIYVGSSVDPGVMRQLFG
ISSLDEIQPQFVLQQYDNPLSKKLNDVVNEIRRQRCSYLRLKLCKKGDASGMLFFSYMVE
DKTPNGLSYVEFLVHVHRQIQTKMP
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcccggggtacccagaccgggcaatgccccaccttattacaaccctagttct
gttactgatggtatgcaaaatcttcaaatcaaccgacccactggaccgccaggatacgtt
ggccctagacctcctaccccgttaggacaacaacccccaccaccattttcttcgtcagct
cagcggccttcatcgttttccgggtcatttccaatgacccgtcctggcgcgcccccacct
ggtgtccttcctggtggtcctctacaagcaacattgccccaaaatgtagcttcttataga
ccttctggacctcctccgccctttgggtcaaggcctccgcctcctggttcattgccctct
tccatgagcacttctggtgtgcctcctggtgctttcccttctacaggacaagtggcaccg
cccagttctcatcccaatcttagtccttttggatcatcatcccctttgacaacgggtcca
atttttccaccttcaagcactcccggccctgctagtaatggacctcccgcatttggatca
ggtgggatgcaacgtggaccccaattttcttcagctggaagtccaccaccaccactgtca
tcacggcaagtaggtcctgcaccttctcctgttccgttcactagggcaccttctcctgtt
ccgttcactagggcaccttctcctgttccgaacatgcgtcctctgcatggaagtcctcct
actggtgcaccatcaggtcctatgcaaccacctccatttgctttaccattcccttcaggt
atgccacctccttcaggttccttgccatttgcagcaccacctcaaggtgtagctcctcct
tcgggctctccgtatggccaacaagcatggcaaatgcaaccccgacaggtggctccagct
ccacctattcctggttcttcgcaaccgcccagaatgtttgggatgccgccacaacctcca
gatcaatctatggctactatatcgcctgctatgggtcatatgggagcacctatggctggc
ccatcaaagatcgatcccaatcaaatcccacgccccataccaagtatctctgtgattctg
catgaaactcgtcaggggaatcaggccaacctccctccgcccgccacaagtgattatatt
gtcaaggacactggtaattgcagcccacggtacatgagatgtactatcaatcagatccca
tgcactgttgatctcttgaccacatctggaatgcagttggctttgatggtccaacccctt
gctcttcctcacccatctgaggagcccatccaacttgtggactttggagaaagtggtcct
gtacgatgttctcgttgcaaaggctacgtcaatccattcatgaagtttattgatcaggga
agacgttttgtctgtaatttatgtggatatacggatgaaactccgtctgactaccagtgc
aatctaggtccagatggtagacgtagagatgccgatgaaaggccagagctatgtagggga
acagttgaatttgtcgctacgaaggagtatatggtccgtgacccaatgcctgctgtgttt
ttcttccttattgatgtatccatgaatgccatacagattggtgcaactgcagcggcttgc
agtgcaatcagccaagttattgctgatcttcctgatggtcctaggacaatggtaggtgtc
gctacatttgactcaacaatccatttctacaacctgaaacgtgaattacagcagccgctc
atgctaatagttcctgatgtccaagatgtttacactcctcttcaagctgatgttatagtt
caactttctgagtgccgccaacatttggagctattgctagaaaatatcccaaccatgttt
gagaataacagaacagctgactcagcctttggtgcagcagtcaaggctggtttcttggca
atgaagaatacaggagggaaacttctagtatttcagtcagtcttaccatctgtcggtttt
ggagccctttctgctagagaggctgagggtaggacgaatatctctgctggagagaaggag
gcccataaattactccaaccagcagacaaagttttgaaggcaatggctgttgaacttgca
gagtaccaggtgtgcgttgatgtatttattaccacccaaacttatgtggacattgcttca
atttctgtcatcccaagaactactggagggaaggtgtattattatttccctttctctgct
ctttctgagcctgccaagctttacaacgatcttcgatggaatgtcacgaggccccaaggt
tttgaggcagtcatgcgtgtaagatgtagccagggtatccaagttcaggaatactctgga
aacttctgcaagcgaattccaaccgatgttgacctacctacgattgattgtgacaaaact
ataatggtaactttgaaacatgatgacaaactgcaggatggctcagaatgcgcttttcag
tgtgctcttctttacacaactgtgtatggccaaagaagaatacgagtgtctaccttatct
ctaccgtgcacgactctgctaagtaatctgttccgctcagctgacttagacacacaattt
gcttgtttcttgaagcaagtggcgaacgaaatcccttccagtccacttccacaagtcagg
gaacaagtgacaaacctttgcatcaacatcctgcattcatatcgcaaattttgtgctaca
gtttcgtcagctggacaacttatccttccagaggcgcttaaacttctgcctctatacacc
cttgctttgattaaaagtacgggattacgaacagatgggcgaatagatgataggtccttc
tggatcagttatgtttcttcaatttctactgctttggcaatcccactggtgtacccccgg
atggtggctatccaggacctcatctcgaaggagacggatggatctattatacctccttcg
atcccgctatccagtgaacatgtgaatgatgatggaatctatcttcttgagaatggggag
gattgtttaatttatgttgggagctctgtggatcctggtgtgatgcgtcaactgtttggc
atttcctcactcgatgaaattcaacctcagtttgtactgcagcaatatgacaatccactg
tcgaagaagctaaatgatgttgtaaatgagataaggcgccaacgatgctcctacctccgc
ttgaaattgtgcaagaaaggagatgcatcaggaatgctattcttctcttatatggtagaa
gacaagactcccaatggcctctcctacgtggagtttttggtacatgtccacaggcagatt
caaactaaaatgccttga
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integrated database retrieval system
