Rhododendron vialii: 131312010
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Entry
131312010 CDS
T09330
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
131312010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131312010
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
131312010
Membrane trafficking [BR:
rvl04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
131312010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
131312010
NCBI-ProteinID:
XP_058195682
LinkDB
All DBs
Position
12a:complement(31021578..31034628)
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AA seq
1013 aa
AA seq
DB search
MAIRRLSLLISVVIAALCVESKYMVYNTSQGIVQGKLNVHLVPHSHDDVGWLKTIDQYYV
GSNNSIQVACVQNVLDSLIPALLADKNRKFIYVEQAFFQRWWQDQSELMQNTVKQLVNLG
QLEFINGGMCMHDEAAPHYIDMVDQTTLGHRFIKKEFNVTPRIGWQIDPFGHSAVQAYLL
GAEVGFDSIFFGRIDYQDIAKRKLEKSLEVVWQGSKSFGSSAQIFAGAFPRLYEPPTGFY
FEVGDDSPIVQDNINLFDYNVQERVNDFVAAALAQANITRTNHIMWTMGTDFKYQYAHTW
YRNMDKLIHYVNQDGRVNALYSTPTIYTDAKYAEHQSWPLKTDDYFPYADRRNAYWTGYF
TSRPGLKGYVRVMSGYYLAARQLEFFRGRSEKGPTTDSLGDALAIVQHHDAITGTSKQHV
ADDYAKRLFIGYKEAEELVAASLACMVDSGLKSGCRSSVTKFQQCPLLNITYCPATEVDL
SQGKKLVVVVYNSLGWKRDGVVKIPVIHGNVSVQDSSGQEIESQLLPLANVSLGVRNFYA
TAYVGKSPSVTPRYWLAFTASVPPLGFSTYVISTPKGAAATFATQTLYESKGSENGIIEV
GPGNLKLIYSASEGKLTQYVNTKSSVKASVEQSYSYYSGDDGSQEYYDGSQKYFQASGAY
VFRPNGTFPIASEGQIPFTVLRGPLLDEVHQKINSWIHQVTRVYKEKEHVEVEFTVGPIP
VDDGIGKEIVAQFTTAIKSNKTFYTDSSGRDFLQRIRDYRADWDLQVNQPVAGNYYPINL
GMYIKDDSEEFSVLVDRSVGGSSIVDGQLELMLHRRLRHDDGRGVAEALNETVCVHNKCS
GLTAQGKFYLRIDPLGEGAKWRRSFGQEIYSPFLLAVTEQDTNINVPIFKGMEPSYSLPD
NVAMITLQELEDGKVLLRLAHLYEVGEDKDLSVLASVELKKLFPDKKLRKVTEMSLSANQ
EREEMIKKRLVWKVEGSQNDKSKVLRGGPVDPIKLVVEIAPMEIRTFVIEFPS
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcgacgactgtctctgttgatttcagtggtgatcgctgctctgtgcgtggaa
tccaagtacatggtgtacaacacttcccagggtatagtccaagggaagctcaacgttcat
ttggttcctcactctcacgatgacgtcggatggttgaagactatagatcagtactacgtc
ggttccaacaactccattcaggtggcgtgtgtgcaaaatgtattagattcacttattcca
gcgttgttggctgataagaatcggaagttcatttacgttgaacaggcattcttccagagg
tggtggcaggatcagagtgagctaatgcagaatactgtcaagcagcttgtcaacttgggt
caactagagtttataaatgggggtatgtgcatgcatgatgaagcggccccacactatatt
gacatggtagatcagactacgcttgggcatcggtttattaaaaaggagttcaatgtgact
ccaagaattggttggcaaatcgatccctttgggcattccgcagtgcaggcttaccttttg
ggggcagaggttggctttgactctattttctttgggcgaattgattaccaagacatagct
aagagaaaacttgagaaaagtcttgaggttgtctggcagggctctaaaagttttggttca
tctgcacagatttttgccggggcattccctcgcctttacgaaccaccaactggtttctac
ttcgaagttggtgatgattcccccattgttcaggataatatcaatttgttcgattacaat
gtccaagagcgcgtcaatgattttgtagctgctgctttagcacaggctaatattactcgc
acgaatcatataatgtggaccatgggcacagatttcaagtaccaatatgctcacacatgg
tatcggaatatggacaagctaattcattatgtcaatcaagatggtcgtgttaatgcacta
tattcaaccccaacaatatacactgatgcaaaatacgctgaacatcaatcttggccgctt
aagacggatgactacttcccgtatgcagaccgtagaaatgcttactggactggctatttt
acaagtaggcctggtctgaaaggctatgtgagggtaatgagtggctactatttggctgca
aggcaattggagtttttcagagggaggagtgaaaaaggacctactactgacagtttgggt
gatgctctggcaattgttcagcatcatgatgctattaccggaacttcaaagcagcatgtg
gctgatgattatgcaaaacggctctttataggctacaaggaggccgaggagttggttgca
gcttcacttgcttgtatggtagattcaggattaaaatctggatgcaggagttcagtgacc
aagtttcagcagtgtccgcttctgaacataacttattgtcctgcaacagaagttgatcta
tcccagggaaaaaaattggtggtggttgtctacaattccctggggtggaaaagagatggt
gttgtaaaaattcctgtgatccatgggaatgtcagtgttcaagattccagcggacaagaa
attgagtcacaacttctaccactggctaatgtttctcttggcgtaagaaacttctatgct
accgcatatgtgggaaaatcccctagtgtgacccccaggtattggcttgccttcacggca
tctgttccacctctgggtttcagcacttatgtcatctctactcctaaaggggcagccgct
acttttgcaacacagacattatacgaatccaagggaagtgagaacggtatcattgaagtg
gggccagggaatttgaagcttatttattctgcaagtgaaggaaaacttactcaatatgtt
aatacaaaaagctcggtcaaagcatctgtagagcaatcatatagctattattctggagat
gatggatcccaggagtattatgacggatcccagaagtatttccaggcttctggagcgtat
gtctttcgtcccaatggtacattccctattgcatcagaagggcagattccctttacagta
ttgcgaggaccactacttgatgaagttcatcagaagattaattcatggatacatcaggtc
actagagtgtataaggaaaaggagcatgtggaagttgaattcactgttggccctattcct
gttgatgatggaattggaaaggagattgtagcccagtttacaacagctataaaaagtaat
aagacattttatacagattccagtggacgtgatttccttcaaaggattcgagattataga
gctgactgggaccttcaggtgaaccaacctgttgcaggaaactattaccctattaatctt
ggaatgtacattaaagatgacagcgaagagttctcagttttggtagatagatctgtgggc
ggatccagcattgtggatgggcaactggagttgatgctccataggagattgcgtcatgat
gatggtagaggtgttgctgaggcattaaatgaaacagtttgtgttcataacaaatgcagt
ggattaacagcccaagggaagttttatctcagaattgatcctcttggagaaggagcaaag
tggcgtagatcatttggtcaggagatatattctccatttctgttggctgtcacagagcag
gatacgaatataaatgtgccaatctttaaggggatggaaccctcgtacagtctacccgat
aacgttgcgatgataaccctccaggaacttgaagatggaaaagttctccttcggttggca
cacttatacgaggttggagaggacaaggatctctcagtactggcaagtgtagaactgaag
aaactgtttcctgataaaaagctaaggaaagttacagaaatgagcttatcggccaatcaa
gagagagaagaaatgataaagaagagattggtttggaaagtagaaggctctcagaatgat
aaatccaaagtgttgagaggaggtcctgttgatcctataaagctggtggttgaaattgct
ccaatggaaattcgcaccttcgtaatcgagttcccctcataa
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