Rhododendron vialii: 131312023
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Entry
131312023 CDS
T09330
Name
(RefSeq) glycine--tRNA ligase, mitochondrial 1-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131312023
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rvl01007
]
131312023
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvl03016
]
131312023
03029 Mitochondrial biogenesis [BR:
rvl03029
]
131312023
Enzymes [BR:
rvl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
131312023
Amino acid related enzymes [BR:
rvl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
131312023
Transfer RNA biogenesis [BR:
rvl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
131312023
Mitochondrial biogenesis [BR:
rvl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
131312023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
eIF-5a
Motif
Other DBs
NCBI-GeneID:
131312023
NCBI-ProteinID:
XP_058195706
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Position
12a:31114024..31119382
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AA seq
617 aa
AA seq
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MEAFRQAVVNTLERRLFYIPSFKIYRGVAGLYDYGPPGCAVKSNVLAFWRQHFVLEENML
EVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCKEKLEKDPKITEEK
AAEFKHVIAVLDEFSAEELGSKIKEYGITAPDTKNPLSAPYPFNLMFQTSIGPSGVSPGY
MRPETAQGIFVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFV
DPEDKSHPKFSEVATLEFLMFPRQDQVSGQSARIIRLGEAVSGGIVNNETLGYFIGRVYL
FLTYLGIDKERLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHTDK
SGVPLVAAEKFAEPIEVEKLVITPVKKELGLAFKGNQKMVVEALEAMGEKEAMEMKATLE
SKGEVEFQVCTLGKDVTIKKNMVTISKEKKKEHQRVFTPSVIEPSFGIGRIIYCLYEHSF
YTRPSKGGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKRIAKSLTAAGISYKIDIT
GTSIGKRYARTDELGVPLAITVDSTTSVTLRERDSKQQIRVSIEEVASVVKEVTDGLNTW
NDVLWKYPTHSSAASED
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaagctttccgtcaagccgtcgtcaacaccctcgagcgccgcctcttctacatacct
tctttcaagatctaccgcggcgtcgccggcctctacgactacggccctcctggctgcgcc
gtcaagtccaacgtcctcgccttctggcgtcagcatttcgttcttgaagagaacatgttg
gaagttgattgcccatgtgtgacaccagaagttgtgcttaaggcatcaggtcatgttgat
aagtttactgacctcatggttaaggacgaaaagactggtacatgttaccgtgcggatcac
ttactcaaagatttttgcaaggagaagctagagaaagatcctaagatcacagaagagaag
gcagcagagtttaagcatgttattgcagtgttggacgaattttctgcggaagaattgggt
tcaaagatcaaggaatatggtattactgcgcctgataccaagaaccctctgtctgctccc
tatccattcaacttaatgttccagacctcaataggtccatctggtgtaagcccagggtac
atgcgtccagagacagcgcaaggcatttttgtgaacttcaaggatttatactactataat
ggcaacaagcttccttttgctgctgctcagatcggtcaagcttttaggaacgagatatct
cctcgtcaaggtctattgcgagtccgtgagtttactttggctgagatagaacactttgtg
gatcctgaagacaagtcacacccaaaattttctgaagttgcaacccttgaatttctaatg
ttcccaaggcaagaccaggtgtctggacaatcagcaagaataatacgccttggtgaagct
gtttctgggggcattgtgaacaatgaaacactgggctactttattgggagagtgtatcta
ttcttgacatatctcggaatagataaggagcgcctacggttccgacaacatcttgcaaat
gagatggcacactacgctgctgattgttgggatgctgagattgaatgttcttatggctgg
attgaatgtgttggtattgcggatagatctgcatatgatttacgcgcacacacggataaa
agtggtgtgcccctagtggcagctgagaaatttgcagaacctatagaagtggagaaactt
gttataactccagttaagaaggagctgggccttgcattcaagggtaaccagaagatggtg
gttgaagcattggaggcaatgggggaaaaagaagctatggaaatgaaagccactttggag
tccaagggggaggtagagttccaagtttgcacactagggaaagatgtcactataaagaag
aacatggtgacaatctctaaggagaaaaagaaggaacatcagagggttttcacgccctca
gtaattgaaccctctttcggtatcgggaggataatttactgtctctatgagcattccttc
tatacacggcctagtaaaggcggggatgaacagttgaatgtgttccgttttcctccactt
gtggcccctatcaaatgcactgtattcccattggttcagaatcagcaatatgaggaagtt
gccaaacgcatagccaaatcattaactgctgctgggatctcatataagattgacataaca
ggtacgtcaatagggaagcgatacgcgagaacagatgaacttggggttccccttgccatt
acagtggattcgacaacttcggtcactctgcgagagagggacagcaagcaacagattcga
gttagtatagaggaggtggcatctgtggtgaaggaggtgaccgacgggttgaacacatgg
aatgacgtgctgtggaagtacccaactcattcatctgctgcatctgaggattga
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