Rhododendron vialii: 131312024
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Entry
131312024 CDS
T09330
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
rvl
Rhododendron vialii
Pathway
rvl04141
Protein processing in endoplasmic reticulum
rvl04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131312024
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
131312024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rvl03110
]
131312024
04131 Membrane trafficking [BR:
rvl04131
]
131312024
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
rvl04091
]
131312024
Chaperones and folding catalysts [BR:
rvl03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
131312024
Membrane trafficking [BR:
rvl04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
131312024
Autophagy
ER-phagy
Other ER-phagy associated proteins
131312024
Lectins [BR:
rvl04091
]
L-type lectins
131312024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
CFAP143
Motif
Other DBs
NCBI-GeneID:
131312024
NCBI-ProteinID:
XP_058195707
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All DBs
Position
12a:complement(31196101..31200708)
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AA seq
536 aa
AA seq
DB search
MEEGKRRIFLQFGFLLLIGCFASQLLLASSDPIFYESFDESFEGSWIVSEKEDYKGVWKH
AKSEGHDDHGLLVSEKVRKYAIVKELDEPVKLKDGTIVLQFETRFQNGLECGGAYLKYLR
PQDAGWTAKGFDNESPYSIMFGPDKCGATNKVHFILKHKNPKTGEYVEHHLKYTPSVPSD
KLTHVYTAILEPNSDIRILIDGEEKKKGNFLSSEDFAPALIPAKTIPDPDDKKPEDWDER
ANIPDPDAVKPEDWDEDAPMEIEDEEAEKPEGWLDDEPEEIDDPEATKPEDWDDEEDGEW
EAPKIDNPNCETAPGCGEWKRPTKANPAYKGKWHAPLIDNPNYKGIWKPQEIPNPSYFEL
ERPDFEPIAAIGIEIWTMQDGVLFDNILIASDEKVAESYREKAWKPKFEVEKENEKAEEA
AAASSDGLKGFQKAVFDVLYQIADISFLSEHKSKILELIEQAEKHANLTIGVIISIIVVI
FTLLFKILFGGKKPAKVSSETSNAEEAETSNKEKEEEIEKEDTAAAPRRRTTRRDT
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggtaaacggaggatttttctgcaatttggatttctgctcttgatcggttgc
tttgcttcccagctcctcctagcttcttctgatccgatcttttacgagtcgttcgatgaa
tcctttgaggggagttggatcgtgtccgagaaagaggattacaaaggtgtatggaaacat
gccaagagtgagggacacgatgaccatgggcttctcgtgagcgagaaggtcaggaagtat
gctattgtgaaagagctagatgagcctgtgaagctcaaggatggaactattgtccttcag
tttgaaactcgcttccagaatgggcttgagtgtggtggtgcatatttgaaatatcttcgt
cctcaggatgctggatggactgctaaggggtttgacaatgagtccccctactctatcatg
tttggacctgataaatgtggggctacaaacaaggtccactttattctaaagcataagaac
cccaagactggagaatacgttgaacaccacctcaagtacacaccctctgtaccatccgac
aagctgacccacgtttatactgccattctggaacctaacagtgatatacggatccttatt
gacggtgaagagaaaaagaagggtaatttcctctctagtgaggattttgcgccagcactt
attcctgctaaaaccattcctgacccagatgataagaagcctgaggattgggatgagagg
gccaatattccggacccagatgcagtaaaaccagaagactgggatgaggatgcaccaatg
gaaattgaagacgaggaagcggaaaaaccagaagggtggttagatgacgagccagaagag
attgatgatcctgaggcaacaaagccagaagattgggatgacgaggaagatggtgaatgg
gaggctccaaagattgacaaccctaattgtgagacggctcctggttgtggtgagtggaag
aggccaacaaaggcgaacccagcttacaagggaaaatggcatgccccacttatcgacaac
cctaattacaagggtatctggaagccgcaggagattccaaaccctagctacttcgaactt
gagaggcctgattttgagcccattgctgcaattggcatagagatttggacaatgcaagat
ggtgtcttgtttgacaacattttaattgctagcgatgaaaaggtggcagaatcgtacagg
gagaaagcttggaaacctaagttcgaagtggagaaggagaatgaaaaggccgaggaagca
gctgctgcatcttcagacggtctcaaaggcttccagaaggcggtgttcgatgtactctac
cagattgcggacatctctttcttgagtgagcacaagtctaaaatcctggaactcattgag
caagccgagaaacatgcaaacctgaccattggtgtcatcatctccatcatagtggttatt
ttcactcttctattcaagatccttttcggcgggaagaaacctgcaaaagtgagttcagaa
acatccaacgcagaagaagctgagacttcaaacaaagagaaggaagaggagattgagaag
gaagatacagctgctgctcctcgtcggaggactaccaggcgtgatacctag
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