Rhododendron vialii: 131312329
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Entry
131312329 CDS
T09330
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131312329
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rvl04812
]
131312329
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
131312329
Cytoskeleton proteins [BR:
rvl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
131312329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
PDS5
Adaptin_N
Tti2
UTP20
HEAT_Maestro
INTS1_R4
MMS19_C
MMS19_N
HEAT_DAAF5
Dopey_N
UNC45-central
SEN1_N
DUF7217
Motif
Other DBs
NCBI-GeneID:
131312329
NCBI-ProteinID:
XP_058195992
LinkDB
All DBs
Position
13a:4733616..4749126
Genome browser
AA seq
1432 aa
AA seq
DB search
MEEALEMARSKDTKERMAGVERLYQLLEASRKTLSSSEVTALVDCSMDLLKDNNFRVSQG
ALLALASAAVLSGEHLKLHFNALVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYAWAHKSWRVREEFARTVTSAIGLFASTELPLQRAILPPILQMLNDPNHAVREAAI
SCIEEMYTQVGPQFRDELQRHNLPTSFLKDITARLERIQPKVHSSDGLPNNYTAVPIKPA
NLNPKRSSPKAAKNSTREVSLFGGDGDVTEKPVDPIKVYSEKELTREFDKITSTLVPEKD
WSVRIGAMQRVEGLVIGGATDYPCFRGLLKQLVAPLSTQLSDRRSTIVKQACHLLSFLSK
ELLGDFEACAETFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVIPRIADCAKNDR
NAVLRARCCEYALLVLEYWADAPEIQRAADLYEDLIRCCVADAMSEVRATARTCYRLFAK
TWPERSRRLFSTFDPVIQRVINDEDGGMHRRHASPSVRERSSQMSFTPQTHAPSNLAGYG
TSAIVAMDRNSSLTAGTSLSSGLLFSQAKPVGKGTERSLESVLHASQQKVTAIESLLRGL
HASDKYNPSLRSSSLDLGVDPPSSRDPPFPLAVPASKNIATSLGLDTTVTGVPKASNRNG
GLALSDIITQIQASKEAAKFSYHSTEGAEPLSSLSSYSAKRASEKLQERGSVEANADARE
ARRFMNLQVERQYSDTSYRDANFRDSHNSYVPNFQRPLLRKNASARVSATRRSFDDSQLS
FGEMSSYVDGPASLNEALSEGLSPSSDWNARVAAFNYLHSLLQQGPRGIQEVTQNFEKVM
KLFFQHLDDPHHKVAQASLSTLADIIPTCKKPFESYMERIMPHVFSRLIDPKELVRQPCS
TTLEIVSKTYGIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNSEGSGNGGILK
LWLAKLTPLVYDKNTKLKDAAVKCIISVYSHFDSVAVLNYILSLSVEEQNSLRRSLKQKT
PRIEVDLMNFVQNKKERQRPKSSYDPSDVVGTSSEEGYIGISRQNHLFGRYSGGSIDSDG
GRKWSSAQESTPVTGSIGQDVSDQTQEHLYLGLGAGVNSEVLSTKTKDLKYTASSMDSSV
NLEASSTPRLDVNGLMRYDNQSVTVGIKHDNDAPTELDLNHSKLEALKINSTPDIGLSIP
QLLHLICNGNDESPSASKRSALQQLIETSIANDPSIWSKYFNQILTVVLEVLDDSESSIR
ELALLLISEMLKNQGDAMEDSVEIVIEKLLHVAKDIVPKVANEAEHCLAIVLSQYEPFRC
LTVIVPLLVTEDEKTLVSCVNCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKT
VVFCLVDIYIMLGKSFLPYLEGLNSTQLRLVTIYANRISQARSGTAIDVNHD
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcgctcgaaatggcgcgctccaaggacaccaaggagcgaatggccggcgtg
gagcgcctctaccaactcctcgaagcttccagaaagaccctgtcctcgtccgaagtcacc
gcgctcgtcgactgctcaatggatctcttgaaagacaacaacttcagggtttcccagggg
gcgctgctcgccctcgcctccgcagccgttctgtccggcgagcacttgaagcttcacttc
aatgccctggttccagccgtcgttgagcggctgggtgacgggaaacagcccgttcgcgat
gccgccaggcgcctcttgctcactctcatggaggtttcttcaccaactatcattgttgag
agagcagggtcttatgcttgggcacacaaaagttggagagtgcgagaagagtttgctcgt
actgtcacatcagctattggtctttttgcatctactgagcttccgcttcaacgagctatt
cttcctcctattttgcagatgttgaatgatccaaatcatgccgtgcgggaagcagctata
tcatgcattgaggagatgtatactcaggttgggccacaattccgcgacgaacttcagcgt
cataatcttccgacatcatttttgaaagacattactgccaggctagagagaattcaacca
aaagtccactcctcggatggacttccaaataattacactgctgttccgatcaagcctgct
aaccttaacccaaaaaggagcagtccaaaagccgccaagaattccactcgggaggtgtct
ctcttcggaggagatggtgatgttacagaaaaaccagttgacccaattaaagtttactcc
gagaaggagctaacgagggaatttgataaaattacttcgactctcgtacctgagaaagat
tggtctgtccgtatcggagccatgcagagagttgaaggtcttgttattggaggagcaact
gactatccatgtttccgtggacttctgaaacaacttgttgcccccttgagcactcaattg
tctgatcgaaggtctaccattgtaaaacaggcttgtcacctattgagctttctgtctaaa
gagctcttgggagattttgaagcgtgtgcggaaacattcattccggtccttttcaagctt
gttgtgataactgtccttgtaattgcagagtctgccgataattgcattaaaacgatgttg
cgaaactgcaaagtggctcgtgttattcctcgtatagctgattgtgctaagaatgaccgt
aatgcagtacttcgtgctaggtgctgtgagtatgcccttttagttctagaatactgggct
gatgcacctgaaatacaacgggcagctgacctttatgaagaccttataaggtgttgtgtt
gcagatgcaatgagtgaggttcgagcaactgcaagaacatgctataggctgtttgcaaaa
acatggcctgagcgttctcggagactattttcaacatttgatcctgttattcaaagggta
ataaatgacgaggatgggggaatgcatagacgacatgcttctccttccgtgcgtgagaga
agttcacaaatgtcttttaccccacaaacacacgccccttctaatcttgctggatatgga
acttcagctattgttgcaatggacagaaattcaagtctgaccgctggtacatccctctct
tctgggctactgttctcccaggcaaaaccggtaggtaaaggaacagaaagaagcctggaa
agtgtgctgcacgcaagccaacagaaggtgactgctattgaaagcttgcttagaggttta
catgcatctgacaagtataatccttctctcagatcatccagtttggacctaggagttgac
cctccatcatcccgtgatccaccgttccctcttgctgttcctgcttcaaaaaatattgca
acctctctagggcttgatacaactgtaactggcgtgcctaaagccagtaatcgcaatggt
ggcttggctttgtctgatatcatcactcagattcaggcttccaaagaagctgctaaattt
tcatatcatagtactgagggagctgagcctttgtctagcctgtcatcctactctgctaag
agagcttctgaaaagcttcaagaaagaggttctgttgaagcaaacgctgatgctagagaa
gccaggcgatttatgaacttgcaagttgagaggcaatactcagacacctcatacagagat
gcaaatttcagggattcacataacagttatgttcccaatttccagaggccacttttgaga
aagaatgcttccgcaagagtgtctgctaccagaaggagttttgatgatagccagctgtca
tttggggaaatgtcaagctatgtggatggtccagcttctctcaatgaagctctgagtgag
ggactcagtccgagttcggactggaatgctagggttgctgcatttaattatctccattct
ttgctgcagcaaggtccgagaggtattcaagaagttacacaaaattttgagaaggtgatg
aagttgtttttccagcacttggatgatccccaccataaagttgcccaagcatctctttca
acactggcagatattattcccacttgcaaaaagccctttgaaagttatatggagaggatc
atgcctcatgttttctcaaggttaattgatccaaaggaattagtaaggcaaccttgctca
acgacattggaaattgtcagcaagacttatggcattgattctcttttaccagcattgctt
cggtcactggatgagcaacggtcgccgaaggcaaaactggctgtcattgaatttgccatt
agttccttcaacaagcatgcaatgaattctgaaggctctggaaatggtggcattttgaag
ttgtggcttgctaaattgacaccattagtctatgacaagaatacgaaactgaaggatgca
gctgttaagtgcattatatcagtttactcccactttgactcagtggcggtcttgaattac
attcttagtctatcagttgaagaacaaaattccttgagacgatcccttaagcagaaaacg
cctcgtatagaagtggacttgatgaattttgtgcagaacaagaaagagcgacagcgtccc
aagtcgtcttatgatccatctgacgttgttggaacatcttctgaagaaggatacattgga
atttcaaggcaaaaccacttatttggaaggtactctggtggttctattgacagtgatggt
ggcaggaagtggagttccgcacaagagtcaacgcccgtcacaggttcaattggtcaagat
gtgtctgatcaaacccaagagcacttgtatttgggtcttggggctggtgtcaacagtgag
gttctcagtaccaaaaccaaggacctcaagtatactgccagcagcatggacagcagcgta
aatctggaggcatcttccactccgcgattggatgttaatggactaatgaggtatgacaac
caatcggtcactgttggcatcaagcatgataatgatgctccaactgagttggaccttaat
cattcaaaacttgaggctttgaaaattaactctactccagacataggtctaagcattcct
caacttcttcacctgatttgcaatgggaacgatgaaagcccttctgctagcaagcgcagt
gctcttcagcagttgattgaaacttctattgccaatgatccatccatttggtctaagtac
ttcaatcagattttgacagttgttcttgaggttttggatgattctgaatcatcaatccgt
gaacttgctcttttgctaataagtgaaatgctcaaaaatcagggagatgccatggaggat
tctgtggagattgtaattgaaaaactgcttcatgttgcaaaagacattgttccaaaagtg
gcaaatgaagcagaacattgtttggcaattgtgttgtctcagtatgagccattcagatgt
ctaactgttattgtccctttattggttactgaagatgagaaaactcttgttagttgcgta
aattgtttaacaaagctcgttggcaggctctcccaagaggaactgatggctcagttacca
tcatttttgccggccctttttgaggcatttggaaaccagagtgctgatgttcgcaagact
gttgttttctgtctggtggacatctatatcatgcttggtaaatcattcctgccgtacttg
gaggggcttaatagtactcaactgcggttagtgaccatctatgctaaccggatctcacag
gccaggtcaggtactgcaatagatgttaaccatgattaa
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