Rhododendron vialii: 131312404
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Entry
131312404 CDS
T09330
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00500
Starch and sucrose metabolism
rvl01100
Metabolic pathways
rvl01110
Biosynthesis of secondary metabolites
Module
rvl_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
131312404
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rvl01003
]
131312404
Enzymes [BR:
rvl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
131312404
Glycosyltransferases [BR:
rvl01003
]
Polysaccharide
Storage polysaccharide
131312404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
Glyco_trans_4_4
COG4_N
DUF730
MAD
Motif
Other DBs
NCBI-GeneID:
131312404
NCBI-ProteinID:
XP_058196104
LinkDB
All DBs
Position
13a:29268583..29290239
Genome browser
AA seq
1064 aa
AA seq
DB search
MATKPSTCFFGNGWSSTVPSYCNRHSNLRFCPLPSHRFYPAYCKMRQRNFSSQQKRQAKK
ATPERLPTNALQQNVDEDSKLETLSTDNISSLKYENKSNDGVGTIVAADNSNEKDVDTLT
DENKSNDGVDTIVAADNTNEKDVDTLTVLHQIKPSSVVADGGAELSSVHLPDLIGMIRNA
EKNIILLNQARVRALEDLEMILNDKHALQAQINILETRLAETDARIRIAAQEKVHVELLE
EELQKLRSELFTRGGTGGNMPDAHEENRLSDRTSVHSFGEELSSLKNENMSLKDDLEALK
KELSDVKGTDERVLMLEKERSSLEYALKELEIKLSASQEDVSKLSNLKFECKSLWEKVEQ
LQALLDKATKQADQAISVLQQNQELRKKVDRLEDSLGEANVYKSSSEKLQQFNELMQQKI
KLLEERLQRSDEEIHSYVQLYQESVKEFQDTLTSLKEESKRRALDEPVNDMPWEFWSRLL
LMIDGWFLEKKISTDDARLLREMVWKRDGHICDAYMACKETNEREAIATFLRLTSSPKRA
GLHVIHIAAEMAPVAKVGGLGDVVTGLCKALQKRGHLVEIVLPKYDCMEYERIRDLRALD
LVIESYFDGRLFKNKVWVGVVEGLPVYFIEPHHPGNFFWRGQLYGEQDDFKRFSFFSRAA
LELLLQTGKKPDIIHCHDWQTSFVAPLYWDLYAPKGLDSARICFTCHNFEYQGSAPASQL
ASCGLDVHQLNRPDRMQDNLSHDRVNGVKGAIVFSNIVTTVSPTYAQEVRTAEGGRGLHV
TLNSHSKKFIGILNGIDTDAWNPATDTFLKVQYNASDLQGKAENKEAIRRHLGLSSADVT
RPLVGCITRLVPQKGVHLIRHAIYRTIELGGQFVLLGSSPEPHIQREFEDIANLFKTHEH
VRLILKYDESLSHLIYAAADMFIIPSIFEPCGLTQMIAMRYGAVPIARKTGGLNDSVFDV
DDNTIPTQFRNGYTFLNPDEQVIIWYTLPSPFINLILVKFLKTLQGLNGALDRALNHYKN
NSQSWQQLVQKVMTIDLSWDSSALQYEELYEKSVARARAASSRV
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaagccatcaacgtgctttttcggcaacggatggagtagtactgtccccagc
tactgtaataggcactcgaatttgcgcttctgtcctttgccttctcaccgtttctatcca
gcttattgtaagatgcggcagcgtaacttcagttcacaacaaaagagacaggccaaaaaa
gctactcccgaaaggcttccaacaaatgctctccagcaaaatgttgacgaggactccaaa
ttagaaaccttgtcaacagataacatatccagcttgaagtatgaaaataagtctaatgat
ggcgttggtaccattgtagctgctgacaattcaaatgagaaagatgtggatactctgact
gatgaaaataagtctaatgatggcgttgataccattgtagctgctgacaatacaaatgag
aaagatgtggatactctgactgtgctgcaccagattaaaccttcgtcagtggttgcagat
ggtggagcggaactctcaagcgttcatcttccggatttgataggcatgataaggaatgca
gagaaaaatataatcctccttaaccaagctcgagttcgtgcacttgaagatctcgaaatg
attctcaatgataagcatgctttacaagcacaaatcaacattttagagacgagattagct
gaaactgacgcaagaattagaattgcggcccaagaaaaggtgcatgtggaactactggaa
gaggagttgcaaaagctgcgaagtgagttatttactaggggtggcaccggtggaaacatg
ccagatgcgcatgaagaaaaccgtctttcagataggaccagtgttcattcttttggtgag
gagcttagttcactgaaaaacgaaaatatgtcccttaaggatgatctagaagccctgaaa
aaggagcttagtgatgtcaagggaacagatgaacgtgttctaatgctggagaaagaacgg
tcatccttggaatatgcactaaaagagttggagattaaactttctgcttcgcaggaagat
gtttcaaaactttctaacttgaagtttgaatgcaaaagtttatgggaaaaggtggaacaa
ttgcaggcattgctggataaggcaaccaaacaggcagatcaagctatttcagtcttacag
caaaaccaggagcttaggaagaaggttgataggttggaagattctcttggagaggctaat
gtctataaatcatcatcagagaaattgcaacaatttaatgaactcatgcaacagaaaata
aaacttctggaagaacgtcttcaaaggtccgacgaagagatacattcttatgttcagcta
tatcaagaatctgtgaaagaatttcaggatacacttactagtttgaaagaagaaagcaag
agaagggcactggatgaacctgtaaatgatatgccttgggagttctggagtcgtttactg
cttatgattgatggttggtttcttgagaagaaaatctcaactgatgatgcaaggctttta
cgagaaatggtatggaagagggatggtcatatttgtgatgcttacatggcatgcaaagaa
acaaatgagcgtgaagctatagctacatttctcagactgacatcatcaccaaaacgtgca
ggattgcatgttattcatatcgcagctgagatggccccagttgctaaggttggtggttta
ggtgacgtggtgactggtctttgtaaagcattacagaagagaggacatcttgttgaaatt
gttcttcccaagtatgattgcatggaatatgagcgtattcgtgacttgagggccctagat
ttagtaatagagtcctactttgacggtcgccttttcaaaaataaagtctgggttggtgtt
gttgaaggccttcctgtctattttattgagcctcatcatcctggtaattttttctggagg
ggacaactttatggggagcaggatgactttaaacgtttctcattctttagcagggcagcc
cttgaattgcttcttcaaactggcaagaagccagacataattcattgccatgattggcag
acatcttttgttgccccactttattgggatctgtatgcaccaaaaggattggattcagca
aggatatgctttacgtgtcacaatttcgagtatcaaggaagtgcacctgcttcccaattg
gcatcttgcggccttgatgttcaccagctaaatagaccagataggatgcaggacaacttg
tcacatgatagggttaatggtgttaagggagcaattgtgttctccaacatagtgacaaca
gtttcaccaacttatgcacaagaggttcgaactgctgagggaggacggggacttcatgtg
accctcaattcccactcgaaaaagttcataggaatactgaatggaattgatactgatgca
tggaatccagccactgatactttcctcaaggtccagtacaatgccagtgatctccagggg
aaagcagaaaacaaagaagctataagaaggcatcttggactttcttctgcagatgttaca
cggccattggttggttgcattacaagattggtgccacagaagggtgtgcatcttattaga
catgcaatatatcggacaattgaattgggcggacagtttgtacttcttggttcaagccca
gaaccgcatattcagagggaatttgaggatattgcgaacctttttaagactcatgagcat
gtccggttaatattgaagtatgatgagtctctttcccacttgatatacgcagcagctgac
atgttcattataccatcaatctttgagccttgcggccttacacagatgatagcaatgaga
tatggtgcggtcccaatagcacggaaaacagggggtttaaatgacagtgtttttgatgtt
gacgacaatacaattcctactcagtttagaaatggatacacatttctgaatcccgatgaa
caggtaattatctggtacacattaccaagtccattcataaatttgattctggtaaaattc
ttaaaaactttgcagggactgaacggcgctttggatcgtgcgcttaaccactataagaac
aatagtcagagttggcaacagcttgttcagaaggtcatgacaatagacttgagttgggac
tcatcagcattacagtatgaggagctttatgagaagtctgtggccagagcgagggcagcc
tcaagtcgcgtttaa
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