Rhododendron vialii: 131312617
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Entry
131312617 CDS
T09330
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131312617
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
131312617
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
CAP-ZIP_m
Beta-prop_SCAP
Big_2
Motif
Other DBs
NCBI-GeneID:
131312617
NCBI-ProteinID:
XP_058196484
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Position
13a:complement(13024162..13038700)
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AA seq
1039 aa
AA seq
DB search
MIAEKPSWVRHEGMQIFSIDIQPGWLRFATGGGDHKVRIWNTKSVGRDLEANESTQKLLA
TLRDHFGSVNCVRWAKHGRYLASGSDDQVILIHERKPGSGTTEFGSGEPPDIENWKVAMT
LRGHTADVVDLNWSPDDSTLASGSLDNTVHIWNMSSGICTAVLRGHSSLVKGVTWDPIGS
FVASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR
HSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRGSLSNAQDVKAAATGWANGASKAGD
KESQAYNIIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGT
VATFHFEEKELGQKLSDTELDELKRNRYGDVRGRQANLAETPAQLLLEAASAKQATSKKA
IPDVSQNSTAIKSSNHLVVSTKAPESRVDDGKKDGDGLNKVTNTVQKASPVKQREYRRPD
GRKRIIPEAVGVSAESQALDFPTKGVNNRKEDNGLVLSDSGVREGSMRRTIGGNSDLKER
SGVTARATVSESLVIEKVPASEGKDGTVCVEQKGIVEASASGKLSIRVFDKKEGKDAEPV
CLEARPREHAVNDIVGVGNTFTMRETEIACTRGADTLWSDRVSGNVTVLAGNANFWAVGC
EDGCLQVYTKCGRRAMPTMMMGSAAVFIDCDESWKLFLVTRKGSLYVWDLFNMKCLLHDS
LASLVTADPRSTAKDAGTIKIISAKLSKSGFPLVVLATRHAFLFDMSLMCWLRVADDCFP
ASNFASSWNLGSIQGGEVAALQVDVRKFLARKPGWSRVTDDGVQTRAHLESQLASALALK
SPSEYHQCLLSYVRFLAREADESRLREVCENFLGPPTGMADAVSSDPKDLKWDSCVLGMK
KHKLLREDILPAMASNRKVQRLLNEFMDLLSEYETTEVIPDPKSSTPPIELLPTTDQTDS
TPPTTDQMAFALSAADQTGSVQPAGDKTEFAPTEVDQIDSAMPEKDGIESTAPLVNNVDL
DRPSKPLDPAPQVKETDGS
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagagaagccaagttgggttaggcatgagggtatgcagattttctcgattgat
attcaacctggttggcttaggttcgcaactggtggtggtgatcacaaggtccgtatatgg
aacacaaaatctgttggccgggatttggaagctaatgagtcaacacaaaaacttcttgca
acccttcgcgaccatttcgggtctgttaattgtgttaggtgggctaagcacggtcgatat
cttgcctctgggtcggatgaccaggtgattctcattcatgagaggaagcctggttcggga
accactgaatttggtagcggagagccccctgacattgagaactggaaggttgcaatgact
ttaagaggacacacggcagacgtggtggatcttaattggtctccagatgactcaacattg
gcaagtggaagtctggacaatactgtccacatctggaacatgagcagtggcatctgcact
gctgttctcagaggacactctagtctggttaagggggttacttgggatcccattggttcc
ttcgtagcaagtcagtctgatgataagactgttattatctggcgaacaagtgactggagc
ctcgctcacaggacagatggccactgggcgaaatcacttggctctacgttctttaggagg
cttggatggtcaccttgtggccattttataactacgactcatggtttccagaagccaagg
cactctgcacctgttttagagcgaggggaatgggctgccacttttgatttcttaggacac
aatgcgcctattatcgttgtaaagttcaatcattcgatgttcagagggagtttatcgaat
gctcaggatgtcaaagcagcagctactggatgggctaatggggcttctaaggcaggagac
aaagaatcacaggcatataatattattgctattggtagtcaagaccgcacaataacagta
tggacaaccgcaagtcctcgccctctctttgtggccaagcatttcttcacccaaagtgtt
gtggatttatcctggagtcctgatgggtactcactatttgcttgttccttggatgggaca
gtggctactttccattttgaggagaaagaacttggccagaagctaagtgataccgagttg
gatgaactgaaaagaaatcgatatggtgatgtcagaggccgacaggcaaacttagctgaa
acaccagcacagttgttgcttgaagcagcctctgctaaacaagccacaagcaaaaaagcc
atcccagatgtttcacaaaactcgacagccataaaatcttctaatcatttggtggtttcc
acaaaggctcctgaatctcgcgttgacgatgggaagaaggatggggatggattaaacaaa
gtgacaaacactgttcaaaaggcaagtcctgtaaagcaaagagaatataggcgccctgat
gggagaaagaggataatccctgaggcagttggagtgtctgctgagtctcaagcacttgat
ttccctacgaagggggtgaataacagaaaggaagataacggattggttcttagtgacagt
ggcgttagagagggttctatgaggagaacaataggtggaaactctgatctgaaagagcgt
tcaggagtcacagctagggctaccgtcagtgagagtctggtaattgagaaggttccggca
tcagaaggtaaggatggaactgtttgtgtagaacagaaaggaattgtggaagcttctgct
tctgggaagctttcaattagggtttttgacaagaaagaagggaaagatgccgagccagtt
tgtttggaagctcgtcctcgcgaacatgctgtgaatgacattgttggagtgggaaacaca
tttactatgagagaaacggaaattgcttgtacaagaggggcagatactctttggtctgat
agggtatctggcaatgtcactgttttggctggtaatgccaacttctgggctgttgggtgt
gaggatggatgcctacaggtgtacacaaaatgtgggagacgtgccatgccgactatgatg
atgggatctgcggcggtattcattgattgtgatgagagttggaagttgtttcttgtcacg
aggaagggatccttgtatgtatgggatctgttcaacatgaaatgtctccttcatgattca
ttggcttcactggttactgcagatccaagatcaactgccaaagatgcaggcacaatcaaa
atcatatctgcaaagctatcaaagtctggttttcctcttgttgttctagccacacgtcat
gccttcctttttgatatgagcctcatgtgttggcttagggttgcggatgattgcttccct
gcatcgaattttgcaagttcatggaacttgggctctattcagggtggtgaggttgctgct
ttacaggtggatgtgaggaaattcttggcaaggaagccaggttggagcagagtaaccgat
gatggcgtgcaaacgcgtgctcatttggaatctcaacttgcatctgcgctggcattgaag
tccccgtctgaatatcaccagtgccttctgtcctacgtgcgatttctggcaagagaggcg
gatgagtcccgtttgcgggaagtttgtgagaactttcttgggcctccaactgggatggct
gatgctgtatcttcagatcccaaggacctgaaatgggattcctgtgtgctgggaatgaag
aagcacaaacttttaagggaagatattcttccggcaatggcatcaaacagaaaagtccag
cgtcttcttaatgaattcatggatctcctatctgaatatgaaacaaccgaagtcattccg
gaccccaaaagttccacccctccgatagaattgctgcccacaacagatcaaacggactcc
acccctccaacaactgatcaaatggcttttgccctttcagcagcagatcaaacgggttca
gtgcagccagctggtgataaaacagagtttgcccccacagaagtggatcaaattgactca
gccatgcctgaaaaagatggaatagagtccacggcgcccctagtaaacaatgttgatttg
gaccgaccttcgaagccattagatccggccccacaggtgaaagaaacagatggttcctga
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