KEGG   Rhododendron vialii: 131312770
Entry
131312770         CDS       T09330                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
rvl  Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rvl04812]
    131312770
Cytoskeleton proteins [BR:rvl04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     131312770
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_EIPR1 eIF2A Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_HPS5
Other DBs
NCBI-GeneID: 131312770
NCBI-ProteinID: XP_058196722
LinkDB
Position
13a:complement(26063261..26077457)
AA seq 859 aa
MAIRGYKLQEFVAHSGSVNCLSIGKKTCRLFATGGDDQKVNLWSIGKSTSLMGLSGHASP
VESVTFNSAEVLVLAGASAGVVKLWDLEETKMVRTLTGHRSNCTAVEFHPFGEFFASGAM
DTNLKVWDTRKKGCIHTYKGHTQGISAVKFTPDGRWVVSGGLDNVVKVWDLTAGKLLHDF
KFHEGHIRSLDFHPLEFLLATGSADRTVKFWDLETFEPIGSVRPEATGVRSITFHPDGRT
LFCGLDDSLKVYSWEPIVCHDAVDMGWSALGDLCIHDGNLMGCSYYRNSVAVWAADISLI
KPYGVVLLPEQDSQFEQKHDLQESPLRKVGIHRRTASSLRCSSPEYETKEIKTIYVDTAG
ANPVASKRAGSYTSPKVVPPSDSKEMNSLPNQKQSPAVGVHAKSVGQTNAKSFIVPSVVP
RDCPDGKDSTNARRESNTSARAGIGMPLRPPHVRRPPATKFDADMLSVPSESEPYRKTSG
DTAVDPTFHDRLVADDNAKDMSAEKHLDIKSVAQKFDKVLSPKTPSSKKNCPESLNGTEG
TKAVKYVNGVAVVRGRTRSLVERFEMKERSSIDEFQAPDTSPESLSEVAKTSPMLNGHPP
ITGRELPSFNAGNLTVDVIGIGIRSGANNSHPQITGQKVPSANDVNHTEDLMQNHDVLLS
TLRSRLTKLQVVRHFWERNDIKGAIDAVKKFPDHSVQADLISILMEKMEILSLDLFSCLL
PVLLCLLDSKIERHANISLEMLLKLVAVFGPVVRSTISAPPAVGVDLHAEQRLKCCNQCS
IQLQKIQNILPALVSCFYLSNQWCHCLKEGRFAGKMCSRTKSRSASLITYLAIHAHWHGR
VNSSWILQRNSFDYLTEFI
NT seq 2580 nt   +upstreamnt  +downstreamnt
atggcgatacgcggatataaactgcaggagtttgtggcccattcggggagtgtgaactgt
cttagtattgggaagaagacttgtcgacttttcgccaccggtggggatgatcagaaggtg
aatctttggtcgattggcaagtcgacttctttaatgggcctatctggtcatgcgagtcca
gtagaatctgtaacatttaattctgcagaggttttagttcttgctggagcttctgctggt
gtagtcaagttgtgggatctagaagaaacaaagatggttcgcactcttactggacacaga
tccaattgcactgctgttgaattccatccatttggtgaattttttgcctctggtgccatg
gatactaatctaaaggtctgggataccagaaagaaaggatgcattcacacatacaagggt
catactcaaggaattagtgcagttaaattcactcctgatggtcgttgggtagtatctggt
ggacttgataatgttgtaaaggtatgggacctaactgctggaaagctcttgcatgatttt
aagttccatgaaggacatattcgatccctagatttccatccccttgagttccttttggca
acaggttcagcagacagaacagtgaaattttgggatttggagacctttgaaccgattgga
tctgtcagacctgaggcaacaggagtgcgatcaattacctttcacccagatggtagaacc
ctgttttgtggattggatgatagtttaaaggtttattcatgggagcctatagtttgtcat
gatgctgtggatatgggatggtcagcgctgggtgacctctgtatccatgatggtaacctc
atgggttgctcatattatcggaactctgttgcagtttgggcagcagatatttcgcttatc
aagccctatggggttgttcttttacctgagcaagatagccaatttgagcagaaacatgat
ctccaggaaagccctttgcggaaagtagggattcatagaaggactgcttcaagtttgcgc
tgctcgtccccagagtatgagactaaagaaataaaaacgatatatgtggacactgcagga
gcaaatccagttgcttcaaagagagctgggtcctatacctctcctaaggttgtaccacca
tctgattccaaggaaatgaatagcctcccaaaccagaagcagagtcctgcagttggcgtg
catgcaaaatcagtcgggcaaacaaatgctaaatccttcatagtacctagtgttgtacct
cgggattgtcccgatggaaaagactcgaccaatgcccgaagagaatcgaatacctctgct
agggctggcattggtatgcccctcaggccacctcatgtacggaggccaccagcaaccaaa
tttgatgcagatatgctttcagtgccttctgaatctgaaccttataggaaaacaagcggt
gatactgcagtggatccaaccttccatgacaggcttgtagcagatgataatgctaaggat
atgtctgcggaaaagcatttggatatcaagagtgttgcccagaagtttgacaaagtttta
tcaccaaagacaccctctagtaaaaaaaactgtcctgagtccctcaatggcactgaaggg
acaaaagcagttaaatatgtgaatggagtagcagttgtacgaggaagaacacgctctttg
gttgagaggtttgaaatgaaagagagatccagtatcgatgaatttcaggcacctgataca
agccctgagagtttatctgaggtggctaaaacatcccccatgctgaatggacatccacca
ataactggacgggagttgccttcttttaatgctggtaatcttactgttgatgtgatagga
attgggattcgttctggagctaataatagtcatcctcaaataactggacagaaggtgcca
tctgctaatgatgttaatcatactgaggatcttatgcagaatcatgatgtattgttaagc
acccttcggtcccgcttgacaaagttgcaggtggtgcggcatttttgggaacggaatgat
attaagggtgctatagacgctgtgaagaagtttcctgatcattctgtacaagcagacctg
atcagcattctcatggagaaaatggagattctcagcttagatttgttctcatgcttgctc
cctgtgcttttgtgtttactggatagcaagatagaaaggcatgccaatatttccctggag
atgctattgaagctcgtagcagtctttgggccagtagtccgttcaaccatttcagcacct
ccagccgttggcgttgatcttcatgcagaacaaagactcaaatgctgcaatcaatgctct
atccagctccaaaagatccagaatattcttcccgcgcttgtaagctgcttttatctctcg
aatcaatggtgccactgtttgaaggaggggaggtttgctggcaaaatgtgctcaagaact
aaatctcgttctgcaagcctcataacctaccttgccatccacgcccattggcatggaagg
gtcaatagcagctggattcttcaacgaaattcatttgattacctaacagaatttatatga

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